RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 SMOQ99835 787 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 MED10Q9BTT4 135 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 ZDHHC5Q9C0B5 715 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 MKRN2Q9H000 416 aaKnown RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 GAREM1Q9H706 876 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 DMAP1Q9NPF5 467 aaPredicted RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 WSB2Q9NYS7 404 aaPredicted RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 PLK2Q9NYY3 685 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 SMC3Q9UQE7 1217 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 BTBD3Q9Y2F9 522 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 STON1Q9Y6Q2 735 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 ASH1LQ9NR48 2969 aaKnown RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 CCDC130P13994 396 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 TNNI1P19237 187 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 STAT6P42226 847 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 DGKGP49619 791 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 CASP4P49662 377 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 PSMD6Q15008 389 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 RABEP1Q15276 862 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 DCAF12L1Q5VU92 463 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 NUDT18Q6ZVK8 323 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 CACUL1Q86Y37 369 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 XPO6Q96QU8 1125 aaKnown RBP16.27■□□□□ 0.2
SSR4-204ENST00000370087 NACA2Q9H009 215 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 PRDM16Q9HAZ2 1276 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 TM7SF3Q9NS93 570 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 KIAA1522Q9P206 1035 aaPredicted RBP16.27■□□□□ 0.2
SSR4-204ENST00000370087 HMGXB4Q9UGU5 601 aa16.27■□□□□ 0.2
SSR4-204ENST00000370087 HELZ2Q9BYK8 2649 aaKnown RBP16.27■□□□□ 0.19
SSR4-204ENST00000370087 FAM149AA5PLN7 773 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 GOLGA8CPA6NN73 597 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 CLIC2O15247 247 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 ZBTB24O43167 697 aaPredicted RBP16.26■□□□□ 0.19
SSR4-204ENST00000370087 AP1G2O75843 785 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 STAU1O95793 577 aaKnown RBP16.26■□□□□ 0.19
SSR4-204ENST00000370087 PRB1P04280 392 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 FAM163BP0C2L3 166 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 IL12RB1P42701 662 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 CYP2J2P51589 502 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 CYP4F3Q08477 520 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 CAMK2BQ13554 666 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 HLA-BQ31612 363 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 C8orf34Q49A92 452 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
SSR4-204ENST00000370087 C1orf216Q8TAB5 229 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 SMARCD1Q96GM5 515 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 DKK4Q9UBT3 224 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 NUDT5Q9UKK9 219 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 KALRNO60229 2985 aa16.26■□□□□ 0.19
SSR4-204ENST00000370087 NUMA1Q14980 2115 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 ATP8B3O60423 1300 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 GFRA2O00451 464 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 CYP26A1O43174 497 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 ZNF883P0CG24 379 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 MATKP42679 507 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 TPMTP51580 245 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 CEBPZQ03701 1054 aaKnown RBP16.25■□□□□ 0.19
SSR4-204ENST00000370087 GEN1Q17RS7 908 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 Q6ZNB5 142 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 ACOT1Q86TX2 421 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 COL26A1Q96A83 441 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 NMUR1Q9HB89 426 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 ITM2CQ9NQX7 267 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 FBXO10Q9UK96 956 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 SHROOM3Q8TF72 1996 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 PLXNA2O75051 1894 aa16.25■□□□□ 0.19
SSR4-204ENST00000370087 URB1O60287 2271 aaKnown RBP16.24■□□□□ 0.19
SSR4-204ENST00000370087 A0A1B0GVT2 93 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 VPS37CA5D8V6 355 aaPredicted RBP16.24■□□□□ 0.19
SSR4-204ENST00000370087 TRABD2BA6NFA1 517 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 BCAT2O15382 392 aaPredicted RBP16.24■□□□□ 0.19
SSR4-204ENST00000370087 CER1O95813 267 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 PRKCHP24723 683 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 TXLNAP40222 546 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 COPAP53621 1224 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 MAP3K7CLP57077 242 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 DBX2Q6ZNG2 339 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 METTL3Q86U44 580 aaKnown RBP16.24■□□□□ 0.19
SSR4-204ENST00000370087 PDILTQ8N807 584 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 SLC2A14Q8TDB8 520 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 CYLDQ9NQC7 956 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 COMMD8Q9NX08 183 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 EIF2B4Q9UI10 523 aaKnown RBP16.24■□□□□ 0.19
SSR4-204ENST00000370087 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.24■□□□□ 0.19
SSR4-204ENST00000370087 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
SSR4-204ENST00000370087 METTL12A8MUP2 240 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 HHLA1C9JL84 531 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 C1QL1O75973 258 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 MFAP3P55082 362 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms