RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ZNF510Q9Y2H8 683 aa14.4□□□□□ -0.1
SSR4-202ENST00000370085 HBS1LQ9Y450 684 aaKnown RBP14.4□□□□□ -0.1
SSR4-202ENST00000370085 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 AKR1B15C9JRZ8 316 aaPredicted RBP14.39□□□□□ -0.11
SSR4-202ENST00000370085 PI4K2BG5E9Z4 385 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 TBX18O95935 607 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 ERBB2P04626 1255 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 DESP17661 470 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 MMP8P22894 467 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 GBP1P32455 592 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 GPC5P78333 572 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 CDK17Q00537 523 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 CENPCQ03188 943 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 FAM102AQ5T9C2 384 aaPredicted RBP14.39□□□□□ -0.11
SSR4-202ENST00000370085 C1orf228Q6PIY5 440 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 FAM183BPQ6ZVS7 135 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 SLC26A9Q7LBE3 791 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 BHLHA9Q7RTU4 235 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 CPA6Q8N4T0 437 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 CLEC4CQ8WTT0 213 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 OSCP1Q8WVF1 389 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 NDRG1Q92597 394 aaKnown RBP14.39□□□□□ -0.11
SSR4-202ENST00000370085 PLD4Q96BZ4 506 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 TRIM11Q96F44 468 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 MSANTD3Q96H12 275 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 SERPINB11Q96P15 392 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
SSR4-202ENST00000370085 PLA2G2FQ9BZM2 168 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 DEF6Q9H4E7 631 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 DUS2Q9NX74 493 aaKnown RBP14.39□□□□□ -0.11
SSR4-202ENST00000370085 RRN3Q9NYV6 651 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 ADAM22Q9P0K1 906 aa14.39□□□□□ -0.11
SSR4-202ENST00000370085 SLC12A8A0AV02 714 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 GABBR2O75899 941 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 NFATC1O95644 943 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 IRF1P10914 325 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 GZMAP12544 262 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 UNGP13051 313 aaPredicted RBP14.38□□□□□ -0.11
SSR4-202ENST00000370085 GLULP15104 373 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 HARS2P49590 506 aaKnown RBP14.38□□□□□ -0.11
SSR4-202ENST00000370085 PGFP49763 221 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
SSR4-202ENST00000370085 DCAF6Q58WW2 860 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 ACAD10Q6JQN1 1059 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 MSANTD2Q6P1R3 559 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 OLFML1Q6UWY5 402 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 MMS22LQ6ZRQ5 1243 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 PHF13Q86YI8 300 aaPredicted RBP14.38□□□□□ -0.11
SSR4-202ENST00000370085 UNC45BQ8IWX7 931 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 VCPIP1Q96JH7 1222 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 KLF16Q9BXK1 252 aaPredicted RBP14.38□□□□□ -0.11
SSR4-202ENST00000370085 MFSD1Q9H3U5 465 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 NUDT5Q9UKK9 219 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 STAP1Q9ULZ2 295 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 PAXBP1Q9Y5B6 917 aa14.38□□□□□ -0.11
SSR4-202ENST00000370085 DLL1O00548 723 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 NARSO43776 548 aaKnown RBP14.37□□□□□ -0.11
SSR4-202ENST00000370085 MFAP3LO75121 409 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 DAB1O75553 588 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 SKILP12757 684 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 HNRNPH3P31942 346 aaKnown RBP14.37□□□□□ -0.11
SSR4-202ENST00000370085 NOS2P35228 1153 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 MLLT6P55198 1093 aaPredicted RBP14.37□□□□□ -0.11
SSR4-202ENST00000370085 PRKCQQ04759 706 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 MTA1Q13330 715 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 NNTQ13423 1086 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 NUGGCQ68CJ6 796 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 TRIM67Q6ZTA4 783 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 HFE2Q6ZVN8 426 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 HTR3DQ70Z44 454 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.116e-15■■■■■ 44.6
SSR4-202ENST00000370085 ZNF571Q7Z3V5 609 aaPredicted RBP14.37□□□□□ -0.11
SSR4-202ENST00000370085 XYLT1Q86Y38 959 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 SLC30A5Q8TAD4 765 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 RSPRY1Q96DX4 576 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 C11orf70Q9BRQ4 267 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 SMOC2Q9H3U7 446 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 C8orf33Q9H7E9 229 aaPredicted RBP14.37□□□□□ -0.11
SSR4-202ENST00000370085 ABHD10Q9NUJ1 306 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 SLC12A6Q9UHW9 1150 aa14.37□□□□□ -0.11
SSR4-202ENST00000370085 MRPS17Q9Y2R5 130 aaKnown RBP14.37□□□□□ -0.11
SSR4-202ENST00000370085 TRIOO75962 3097 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 GOLGA8SH3BPF8 625 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 MDM4O15151 490 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 RTN2O75298 545 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 ADH1CP00326 375 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 APOEP02649 317 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 MYBL1P10243 752 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 SLC2A3P11169 496 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 CHKAP35790 457 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
SSR4-202ENST00000370085 RING1Q06587 406 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 RUNX3Q13761 415 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 TRIP4Q15650 581 aaPredicted RBP14.36□□□□□ -0.11
SSR4-202ENST00000370085 SLC44A4Q53GD3 710 aa14.36□□□□□ -0.11
SSR4-202ENST00000370085 ARCQ7LC44 396 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms