RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FGF14Q92915 247 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 USP13Q92995 863 aaPredicted RBP16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 TMEM51Q9NW97 253 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 LIMD1Q9UGP4 676 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 NENFQ9UMX5 172 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 CPQQ9Y646 472 aa16.25■□□□□ 0.19
PRPF38B-202ENST00000370022 ANAPC1Q9H1A4 1944 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 GOLGA8SH3BPF8 625 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 TBX18O95935 607 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 FYNP06241 537 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 NOS2P35228 1153 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 MATKP42679 507 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 KPNA1P52294 538 aaPredicted RBP16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 COG7P83436 770 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 TAF5Q15542 800 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 DEPDC1BQ8WUY9 529 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.197e-13■■■■■ 30
PRPF38B-202ENST00000370022 BAG1Q99933 345 aaPredicted RBP16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 SELENOOQ9BVL4 669 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 KCNK12Q9HB15 430 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 PARVAQ9NVD7 372 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 MARCH2Q9P0N8 246 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 TMEM59LQ9UK28 342 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 NAALADL1Q9UQQ1 740 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 NUMBLQ9Y6R0 609 aa16.24■□□□□ 0.19
PRPF38B-202ENST00000370022 NUP210Q8TEM1 1887 aaPredicted RBP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 KRT3P12035 628 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 RRM1P23921 792 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 CYLC1P35663 651 aaPredicted RBP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 VIPR2P41587 438 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 EFEMP1Q12805 493 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 NNTQ13423 1086 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 DCAF6Q58WW2 860 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 C10orf76Q5T2E6 689 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 TANGO2Q6ICL3 276 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 DNAJC24Q6P3W2 148 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 DEFB106AQ8N104 65 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 BPIFB1Q8TDL5 484 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 SERPINB11Q96P15 392 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 KLF16Q9BXK1 252 aaPredicted RBP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 SMG9Q9H0W8 520 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 SMOC2Q9H3U7 446 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 THG1LQ9NWX6 298 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 RASAL2Q9UJF2 1139 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 NUDT5Q9UKK9 219 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 STAP1Q9ULZ2 295 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 HBS1LQ9Y450 684 aaKnown RBP16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 SCINQ9Y6U3 715 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 DOCK8Q8NF50 2099 aa16.23■□□□□ 0.19
PRPF38B-202ENST00000370022 TCRBV5S1A1TA0A578 114 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 FAM170AA1A519 330 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 ANKRD62A6NC57 917 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 SIGLEC16A6NMB1 481 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 HEPACAM2A8MVW5 462 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 GRAP2O75791 330 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 PSMC3P17980 439 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 USP4Q13107 963 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 SYPL2Q5VXT5 272 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 PLEKHA7Q6IQ23 1121 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 MIB1Q86YT6 1006 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 GJD3Q8N144 294 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 ADAMTS19Q8TE59 1207 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 DQX1Q8TE96 717 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 SH3RF2Q8TEC5 729 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 ZNF653Q96CK0 615 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 ZFRQ96KR1 1074 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 MRPL47Q9HD33 250 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 LUC7LQ9NQ29 371 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 CNOT8Q9UFF9 292 aaKnown RBP16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
PRPF38B-202ENST00000370022 LEFTY2O00292 366 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 LCA5LO95447 670 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 RNASE9P60153 205 aaKnown RBP16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 GPC5P78333 572 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 FCHO2Q0JRZ9 810 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 ZNF77Q15935 545 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 VITQ6UXI7 678 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 PLD4Q96BZ4 506 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 KXD1Q9BQD3 176 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 DDX23Q9BUQ8 820 aaKnown RBP16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 SPTLC3Q9NUV7 552 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 SMPD4Q9NXE4 827 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 SFMBT1Q9UHJ3 866 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 CUL9Q8IWT3 2517 aa16.21■□□□□ 0.19
PRPF38B-202ENST00000370022 SLC12A8A0AV02 714 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 E2F8A0AVK6 867 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 MDM4O15151 490 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 IPO7O95373 1038 aaKnown RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 IGLV3-25P01717 112 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 H2AFZP0C0S5 128 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 ABCB4P21439 1286 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 GBP1P32455 592 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 ZXDBP98169 803 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms