RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TAF4BQ92750 862 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 SCLYQ96I15 445 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 FAXDC2Q96IV6 333 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 KREMEN1Q96MU8 473 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 ALS2CR12Q96Q35 445 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 SYT11Q9BT88 431 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 TUBB2BQ9BVA1 445 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 CCDC94Q9BW85 323 aaPredicted RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 ZNF180Q9UJW8 692 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 NENFQ9UMX5 172 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 GINS2Q9Y248 185 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 ABHD14A-ACY1A0A1B0GW23 586 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 TACC1O75410 805 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 CSDE1O75534 798 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 ASS1P00966 412 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 TNFAIP3P21580 790 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 OSTNP61366 133 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 TFAMQ00059 246 aaKnown RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 TRPC3Q13507 836 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 SGSM1Q2NKQ1 1148 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 PPM1JQ5JR12 505 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 TRAPPC11Q7Z392 1133 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 CDR2LQ86X02 465 aaPredicted RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 IL22RA1Q8N6P7 574 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 ACAP3Q96P50 834 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 NAPGQ99747 312 aaPredicted RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 IRX2Q9BZI1 471 aaPredicted RBP9.28□□□□□ -0.92
TPM3-213ENST00000368545 L2HGDHQ9H9P8 463 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 C2CD2Q9Y426 696 aa9.28□□□□□ -0.92
TPM3-213ENST00000368545 BDP1A6H8Y1 2624 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 MED19A0JLT2 244 aaPredicted RBP9.27□□□□□ -0.93
TPM3-213ENST00000368545 ANO9A1A5B4 782 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 BLACEA4D250 179 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 LINC01387J3KSC0 135 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.93
TPM3-213ENST00000368545 NEMP1O14524 444 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 HOXA11P31270 313 aaPredicted RBP9.27□□□□□ -0.93
TPM3-213ENST00000368545 USP8P40818 1118 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 YARSP54577 528 aaKnown RBP9.27□□□□□ -0.93
TPM3-213ENST00000368545 BPIFB4P59827 614 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 ZNF200P98182 395 aaPredicted RBP9.27□□□□□ -0.93
TPM3-213ENST00000368545 CUL2Q13617 745 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 HLTFQ14527 1009 aaKnown RBP eCLIP9.27□□□□□ -0.93
TPM3-213ENST00000368545 BRD3Q15059 726 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 NXNQ6DKJ4 435 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 SERINC5Q86VE9 423 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 ZNF677Q86XU0 584 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 EFCAB13Q8IY85 973 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 UBALD2Q8IYN6 164 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 SLC35F6Q8N357 371 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 SLC30A5Q8TAD4 765 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 KAT5Q92993 513 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 AGPAT1Q99943 283 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 PI4K2AQ9BTU6 479 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 TRIM6Q9C030 488 aaPredicted RBP9.27□□□□□ -0.93
TPM3-213ENST00000368545 DLL3Q9NYJ7 618 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 TRIM10Q9UDY6 481 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 DERAQ9Y315 318 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 PCDHGC5Q9Y5F6 944 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 TRPV2Q9Y5S1 764 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 MYH10P35580 1976 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 TRIP11Q15643 1979 aa9.27□□□□□ -0.93
TPM3-213ENST00000368545 MACROD2A1Z1Q3 448 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 EPOPA6NHQ4 379 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 LACTBL1A8MY62 500 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 RFXAPO00287 272 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ASLP04424 464 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 YWHAEP62258 255 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 MRPS6P82932 125 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 TMEM132DQ14C87 1099 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 IFI16Q16666 785 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 SPNS2Q8IVW8 549 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 LNX1Q8TBB1 728 aaPredicted RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 TSPAN18Q96SJ8 248 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 TTC1Q99614 292 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 DPH2Q9BQC3 489 aaPredicted RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 CELF4Q9BZC1 486 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 ALG13Q9NP73 1137 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 ENAMQ9NRM1 1142 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ITGA11Q9UKX5 1188 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 PIN4Q9Y237 131 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 SZT2Q5T011 3432 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 CENPFP49454 3210 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 A0A0A6YYK5 440 aaPredicted RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 E2F8A0AVK6 867 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 PRR5-ARHGAP8B1AHC4 643 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 LOC730098B7Z3J9 87 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 FANCGO15287 622 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 MBTPS2O43462 519 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 URI1O94763 535 aaPredicted RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 RB1P06400 928 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 NFICP08651 508 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 H2AFZP0C0S5 128 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 CYP11B1P15538 503 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ATF7P17544 494 aaPredicted RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 FGFR4P22455 802 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ATICP31939 592 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ARHGAP8P85298 464 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms