RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZSWIM8A7E2V4 1837 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 SLC15A5A6NIM6 579 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 BIRC5O15392 142 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 AVILO75366 819 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
CD48-201ENST00000368045 LGALS2P05162 132 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 IGBP1P78318 339 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 ARHGAP1Q07960 439 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 DPYSL2Q16555 572 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 DCAF4L1Q3SXM0 396 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 TIFABQ6ZNK6 161 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 UNC93AQ86WB7 457 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 SHCBP1Q8NEM2 672 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 GSDMBQ8TAX9 411 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 KIF12Q96FN5 646 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 OXNAD1Q96HP4 312 aaPredicted RBP14.82□□□□□ -0.04
CD48-201ENST00000368045 NAF1Q96HR8 494 aaKnown RBP14.82□□□□□ -0.04
CD48-201ENST00000368045 CPB2Q96IY4 423 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 EBNA1BP2Q99848 306 aaKnown RBP14.82□□□□□ -0.04
CD48-201ENST00000368045 NRDE2Q9H7Z3 1164 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 SIRPGQ9P1W8 387 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 GTF2IRD1Q9UHL9 959 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
CD48-201ENST00000368045 GYG2O15488 501 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 GSC2O15499 205 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 TSPAN1O60635 241 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 RFPL1O75677 317 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 APRTP07741 180 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 CYP2C8P10632 490 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 SERPINB3P29508 390 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 RGS7P49802 495 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 TBCCQ15814 346 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 RAB6CQ53S08 254 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 STXBP5Q5T5C0 1151 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 ARHGAP17Q68EM7 881 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 PMF1Q6P1K2 205 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 UNC5AQ6ZN44 842 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 SLC35F5Q8WV83 523 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 CENPIQ92674 756 aaPredicted RBP14.81□□□□□ -0.04
CD48-201ENST00000368045 KHSRPQ92945 711 aaKnown RBP eCLIP14.81□□□□□ -0.04
CD48-201ENST00000368045 ZBTB10Q96DT7 871 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 QKIQ96PU8 341 aaKnown RBP eCLIP14.81□□□□□ -0.04
CD48-201ENST00000368045 RAB6CQ9H0N0 254 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 PLAC1Q9HBJ0 212 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 TXNRD2Q9NNW7 524 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 GPATCH2LQ9NWQ4 482 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 STOML1Q9UBI4 398 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 NUMBLQ9Y6R0 609 aa14.81□□□□□ -0.04
CD48-201ENST00000368045 SPDYE5A6NIY4 337 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 A6NJR5 290 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 CXorf49A8MYA2 514 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 HACD1B0YJ81 288 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 FCHO1O14526 889 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 GRAP2O75791 330 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 MYL2P10916 166 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 ESRRAP11474 423 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 CYP2F1P24903 491 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 CRHR1P34998 444 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 HDAC4P56524 1084 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 SARNPP82979 210 aaKnown RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 TSNAXIP1Q2TAA8 658 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 PPP1R26Q5T8A7 1209 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 POTEAQ6S8J7 498 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 SLC26A9Q7LBE3 791 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 ZNF410Q86VK4 478 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 TTC30AQ86WT1 665 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 TMEM130Q8N3G9 435 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 LRRC52Q8N7C0 313 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 PPTC7Q8NI37 304 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 EMID1Q96A84 441 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 E2F7Q96AV8 911 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 SIGLEC10Q96LC7 697 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 WWP1Q9H0M0 922 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 R3HDMLQ9H3Y0 253 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 ELP3Q9H9T3 547 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.8□□□□□ -0.04
CD48-201ENST00000368045 PPP1R1BQ9UD71 204 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 PAPSS1O43252 624 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 RARBP10826 455 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 MLNP12872 115 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 ATP6V1C1P21283 382 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 L1CAMP32004 1257 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 OCRLQ01968 901 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 PPIL2Q13356 520 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 NAB1Q13506 487 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 BLMHQ13867 455 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 CA9Q16790 459 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 Q3C1V9 767 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 STEAP4Q687X5 459 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 CDHR3Q6ZTQ4 885 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 C12orf29Q8N999 325 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 CCDC110Q8TBZ0 833 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 KCNV2Q8TDN2 545 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 NLRP7Q8WX94 980 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 MCUR1Q96AQ8 359 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 SIKE1Q9BRV8 207 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms