RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 ZNF614Q8N883 585 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 B3GALNT2Q8NCR0 500 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 RIT2Q99578 217 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 DCUN1D5Q9BTE7 237 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 TRPM5Q9NZQ8 1165 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 NDUFAF1Q9Y375 327 aa17.22■□□□□ 0.35
NID1-202ENST00000366595 A0A0A6YYK5 440 aaPredicted RBP17.21■□□□□ 0.35
NID1-202ENST00000366595 MYMKA6NI61 221 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.35
NID1-202ENST00000366595 H2AFXP16104 143 aaPredicted RBP17.21■□□□□ 0.35
NID1-202ENST00000366595 NOS3P29474 1203 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 NEK5Q6P3R8 708 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 OR6Y1Q8NGX8 325 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 CHST12Q9NRB3 414 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 L1RE1Q9UN81 338 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 ITGA4P13612 1032 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 BLOC1S5Q8TDH9 187 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 POLR1BQ9H9Y6 1135 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 MIEF1Q9NQG6 463 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 PDGFRBP09619 1106 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 AP1S2P56377 157 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 NEDD8Q15843 81 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 SMTNL2Q2TAL5 461 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 SYTL1Q8IYJ3 562 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 PNKPQ96T60 521 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 ING4Q9UNL4 249 aa17.21■□□□□ 0.35
NID1-202ENST00000366595 POLRMTO00411 1230 aaKnown RBP17.21■□□□□ 0.34
NID1-202ENST00000366595 MPP3Q13368 585 aa17.21■□□□□ 0.34
NID1-202ENST00000366595 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.34
NID1-202ENST00000366595 PGBD3Q8N328 593 aa17.21■□□□□ 0.34
NID1-202ENST00000366595 SPPL2AQ8TCT8 520 aa17.21■□□□□ 0.34
NID1-202ENST00000366595 TRPC4APQ8TEL6 797 aa17.21■□□□□ 0.34
NID1-202ENST00000366595 FAM118BQ9BPY3 351 aa17.21■□□□□ 0.34
NID1-202ENST00000366595 CDC42EP4Q9H3Q1 356 aaKnown RBP17.21■□□□□ 0.34
NID1-202ENST00000366595 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.34
NID1-202ENST00000366595 NAGPAQ9UK23 515 aa17.21■□□□□ 0.34
NID1-202ENST00000366595 GRAP2O75791 330 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 BAIAP3O94812 1187 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 CASP4P49662 377 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 STRA8Q7Z7C7 330 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 OR6J1Q8NGC5 347 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 STK32AQ8WU08 396 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 POP5Q969H6 163 aaKnown RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 RAD18Q9NS91 495 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 PRRG1O14668 218 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 GAS2O43903 313 aaKnown RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 NR6A1Q15406 480 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 MIER2Q8N344 545 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 ZNF184Q99676 751 aaPredicted RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 DDX18Q9NVP1 670 aaKnown RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 TMEM2Q9UHN6 1383 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 RAD51BO15315 384 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 NCAM2O15394 837 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 MYBP10242 640 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 GZMAP12544 262 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 RAB25P57735 213 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 SPP2Q13103 211 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 CCNG2Q16589 344 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 ARHGAP15Q53QZ3 475 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 RIPOR1Q6ZS17 1223 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 DENND5BQ6ZUT9 1274 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 CCDC36Q8IYA8 594 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 S100ZQ8WXG8 99 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 S100A13Q99584 98 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 WDCPQ9H6R7 721 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 GPAMQ9HCL2 828 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 CCDC162PA2VCL2 907 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 ZNF24P17028 368 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 GRK4P32298 578 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 AVPR1AP37288 418 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 GNA13Q14344 377 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 VPS72Q15906 364 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 INO80DQ53TQ3 878 aaPredicted RBP17.2■□□□□ 0.34
NID1-202ENST00000366595 ZDHHC13Q8IUH4 622 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 CD302Q8IX05 232 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 LPAR1Q92633 364 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 THAP1Q9NVV9 213 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 DKK3Q9UBP4 350 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 ANKRD6Q9Y2G4 727 aa17.2■□□□□ 0.34
NID1-202ENST00000366595 A0A1W2PRG6 482 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 TBC1D12O60347 775 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 NR3C2P08235 984 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 TAF6P49848 677 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 PLIN5Q00G26 463 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 ZNF284Q2VY69 593 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 GLB1LQ6UWU2 654 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 ZNF671Q8TAW3 534 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 ZNF668Q96K58 619 aaPredicted RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 RACGAP1Q9H0H5 632 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 FAM49BQ9NUQ9 324 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms