RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CEP192Q8TEP8 1941 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 PRRT4C9JH25 899 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 NCAM1P13591 858 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 MAOBP27338 520 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 OXTRP30559 389 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 ATP5C1P36542 298 aaKnown RBP14.63□□□□□ -0.07
VPS29-201ENST00000360579 MATKP42679 507 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 CYP24A1Q07973 514 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 TPGS1Q6ZTW0 290 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 TMPRSS7Q7RTY8 843 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 SLCO6A1Q86UG4 719 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 RDH13Q8NBN7 331 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 HNRNPLLQ8WVV9 542 aaKnown RBP14.63□□□□□ -0.07
VPS29-201ENST00000360579 TOE1Q96GM8 510 aaKnown RBP14.63□□□□□ -0.07
VPS29-201ENST00000360579 CLIC6Q96NY7 704 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 VRTNQ9H8Y1 702 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 PRDM16Q9HAZ2 1276 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 WSB2Q9NYS7 404 aaPredicted RBP14.63□□□□□ -0.07
VPS29-201ENST00000360579 USP36Q9P275 1121 aaKnown RBP14.63□□□□□ -0.07
VPS29-201ENST00000360579 PCDHGB2Q9Y5G2 931 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 APC2O95996 2303 aa14.63□□□□□ -0.07
VPS29-201ENST00000360579 FLRT2O43155 660 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 GREM1O60565 184 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 PHACTR2O75167 634 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 AP1G2O75843 785 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 MYL6P60660 151 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 SUZ12Q15022 739 aaKnown RBP14.62□□□□□ -0.07
VPS29-201ENST00000360579 PAQR9Q6ZVX9 377 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 GALNT15Q8N3T1 639 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 ZCCHC9Q8N567 271 aaKnown RBP14.62□□□□□ -0.07
VPS29-201ENST00000360579 XXYLT1Q8NBI6 393 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 WBP2Q969T9 261 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 GPR174Q9BXC1 333 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 KLF16Q9BXK1 252 aaPredicted RBP14.62□□□□□ -0.07
VPS29-201ENST00000360579 XYLT2Q9H1B5 865 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 MIR1-1HGQ9H1L0 117 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 SLC6A17Q9H1V8 727 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 TNMDQ9H2S6 317 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 GAREM1Q9H706 876 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 CD93Q9NPY3 652 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 CYLDQ9NQC7 956 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 ITM2CQ9NQX7 267 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 AGPAT3Q9NRZ7 376 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 TM7SF3Q9NS93 570 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 KRT82Q9NSB4 513 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 STON1Q9Y6Q2 735 aa14.62□□□□□ -0.07
VPS29-201ENST00000360579 SETXQ7Z333 2677 aaKnown RBP14.62□□□□□ -0.07
VPS29-201ENST00000360579 VPS37CA5D8V6 355 aaPredicted RBP14.61□□□□□ -0.07
VPS29-201ENST00000360579 BCAT2O15382 392 aaPredicted RBP14.61□□□□□ -0.07
VPS29-201ENST00000360579 CILPO75339 1184 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 CLSTN1O94985 981 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 CISD3P0C7P0 127 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 TRIM21P19474 475 aaKnown RBP14.61□□□□□ -0.07
VPS29-201ENST00000360579 PDCP20941 246 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 HOXD13P35453 343 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 AP3M2P53677 418 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 ZNF699Q32M78 642 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 FUT11Q495W5 492 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 ZNF667Q5HYK9 610 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 DCAF12L1Q5VU92 463 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 KLHDC10Q6PID8 442 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 FUKQ8N0W3 1084 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 BAHD1Q8TBE0 780 aaPredicted RBP14.61□□□□□ -0.07
VPS29-201ENST00000360579 ZNF507Q8TCN5 953 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 UCMAQ8WVF2 138 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 ERLEC1Q96DZ1 483 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 LRIG1Q96JA1 1093 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 PANK2Q9BZ23 570 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 SMYD3Q9H7B4 428 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 SLC27A6Q9Y2P4 619 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 MORC2Q9Y6X9 1032 aaPredicted RBP14.61□□□□□ -0.07
VPS29-201ENST00000360579 UBE4BO95155 1302 aa14.61□□□□□ -0.07
VPS29-201ENST00000360579 METTL12A8MUP2 240 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 WASH3PC4AMC7 463 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 SYNCRIPO60506 623 aaKnown RBP14.6□□□□□ -0.07
VPS29-201ENST00000360579 DKK1O94907 266 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 TBX18O95935 607 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 P4HA1P13674 534 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 PLA2G4AP47712 749 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 CYP2J2P51589 502 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 AMPD3Q01432 767 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 HLA-BQ31612 363 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 DBX2Q6ZNG2 339 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 TADA2BQ86TJ2 420 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 GLIS3Q8NEA6 775 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 ENGASEQ8NFI3 743 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 RHBDD1Q8TEB9 315 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 PRCCQ92733 491 aaPredicted RBP14.6□□□□□ -0.07
VPS29-201ENST00000360579 SIPA1Q96FS4 1042 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 SMOQ99835 787 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 NUP58Q9BVL2 599 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 PCED1AQ9H1Q7 454 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 CUEDC2Q9H467 287 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 CSNK1G1Q9HCP0 422 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 CGNQ9P2M7 1197 aaKnown RBP14.6□□□□□ -0.07
VPS29-201ENST00000360579 FBXO10Q9UK96 956 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 SCML2Q9UQR0 700 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 ZNF510Q9Y2H8 683 aa14.6□□□□□ -0.07
VPS29-201ENST00000360579 TGFB1I1O43294 461 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms