RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 CLCN3P51790 818 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 C2CD6Q53TS8 623 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 CLYBLQ8N0X4 340 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 RUSC1Q9BVN2 902 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 KLRC1P26715 233 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SGCGQ13326 291 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 RD3Q7Z3Z2 195 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 CDK20Q8IZL9 346 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 FBXO36Q8NEA4 188 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 KIF1CO43896 1103 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 TOMM20Q15388 145 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 FAM45BPQ6NSW5 357 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 CD302Q8IX05 232 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 RNPEPQ9H4A4 650 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SGPL1O95470 568 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SCNN1BP51168 640 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 MAPK7Q13164 816 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 NR6A1Q15406 480 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 NT5DC3Q86UY8 548 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 NACC2Q96BF6 587 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 KCTD14Q9BQ13 255 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 FBXO10Q9UK96 956 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 ZW10O43264 779 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 KPNA1P52294 538 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 COX10Q12887 443 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 PREPLQ4J6C6 727 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SRLQ86TD4 932 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 TPD52L3Q96J77 140 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 ACTR8Q9H981 624 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 PTAR1Q7Z6K3 402 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 ACOX2Q99424 681 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 NAT9Q9BTE0 207 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 ROGDIQ9GZN7 287 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 FAM153AQ9UHL3 310 aa13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-201ENST00000359446 BAIAP3O94812 1187 aa13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 RNFT2Q96EX2 444 aa13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 BCL2L14Q9BZR8 327 aa13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 GPAMQ9HCL2 828 aa13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 WHRNQ9P202 907 aa13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 POLR1DQ9Y2S0 133 aa13.08□□□□□ -0.31
LDLRAD4-201ENST00000359446 KANSL1LA0AUZ9 987 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 PSMC6P62333 389 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 STX4Q12846 297 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 POU6F1Q14863 301 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SYTL1Q8IYJ3 562 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 EPS8L3Q8TE67 593 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 FICDQ9BVA6 458 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CNTNAP2Q9UHC6 1331 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM220BPB1ANY3 271 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMEM114B3SHH9 223 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 MSH4O15457 936 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CNOT3O75175 753 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 ITGB6P18564 788 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 PRKAA1Q13131 559 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CBWD2Q8IUF1 395 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 POMGNT2Q8NAT1 580 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 ALDH2P05091 517 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 VDRP11473 427 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 DDR2Q16832 855 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CCNJLQ8IV13 435 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 AVENQ9NQS1 362 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 STARD7Q9NQZ5 370 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 FBXO28Q9NVF7 368 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 KIAA1257Q9ULG3 409 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 KATNA1O75449 491 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SMNDC1O75940 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CYP11B1P15538 503 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CASP4P49662 377 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 EPHX4Q8IUS5 362 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SCUBE1Q8IWY4 988 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CARD9Q9H257 536 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SLC37A4O43826 429 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms