RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 MAPK7Q13164 816 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 LRRC41Q15345 812 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 TRIM71Q2Q1W2 868 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZNF829Q3KNS6 432 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 POTEGQ6S5H5 508 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 PEX26Q7Z412 305 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 LSMEM2Q8N112 164 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 CHURC1Q8WUH1 139 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 HPS1Q92902 700 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 BORCS5Q969J3 196 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 GDF15Q99988 308 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZNF696Q9H7X3 374 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 TYW1Q9NV66 732 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 PLA2G4CQ9UP65 541 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 NAALADL1Q9UQQ1 740 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 IFT52Q9Y366 437 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 BICDL2A1A5D9 508 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZSCAN5BA6NJL1 495 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 RSPH10B2B2RC85 870 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 E9PMD0 336 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 INHBBP09529 407 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 RSPH10BP0C881 870 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 CCNE1P24864 410 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 CIITAP33076 1130 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 FLT3LGP49771 235 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZNF132P52740 706 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 NR1H2P55055 460 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 C21orf59P57076 290 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 OVGP1Q12889 678 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 RASA2Q15283 850 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 TRMT5Q32P41 509 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 USP41Q3LFD5 358 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 RGS9BPQ6ZS82 235 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 EPM2AIP1Q7L775 607 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 EEPD1Q7L9B9 569 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 NT5DC3Q86UY8 548 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 ULK2Q8IYT8 1036 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 CADM3Q8N126 398 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 DTX3Q8N9I9 347 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 GPRC5AQ8NFJ5 357 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 UNKQ9C0B0 810 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 DISC1Q9NRI5 854 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 DDX56Q9NY93 547 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 RBPJLQ9UBG7 517 aa9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 MTRF1LQ9UGC7 380 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-202ENST00000358207 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.87
SMARCAL1-202ENST00000358207 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 FAM47DPA6NHR8 397 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 J3QRK9 145 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 TNPO2O14787 897 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ATP2A1O14983 1001 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 DENRO43583 198 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 KRT75O95678 551 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CYP2C8P10632 490 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 FCER1AP12319 257 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 FDFT1P37268 417 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 TRAPPC10P48553 1259 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ASIC1P78348 528 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 EDRF1Q3B7T1 1238 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 XKR5Q6UX68 686 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 SLFN11Q7Z7L1 901 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 DAGLBQ8NCG7 672 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CALML6Q8TD86 181 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 FBXL8Q96CD0 374 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 DCUN1D5Q9BTE7 237 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZNF304Q9HCX3 659 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 C6orf203Q9P0P8 240 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 KIAA1024Q9UPX6 916 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 C2orf71A6NGG8 1288 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 GOLGA8CPA6NN73 597 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 B2RBV5 119 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 TP73O15350 636 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 S100A5P33763 92 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 PSMC6P62333 389 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 C1orf146Q5VVC0 180 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 AADACL2Q6P093 401 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 LPCAT2Q7L5N7 544 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 RBM15BQ8NDT2 890 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 PSPC1Q8WXF1 523 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ATP2A3Q93084 1043 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ARMCX1Q9P291 453 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 THEGQ9P2T0 379 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CORINQ9Y5Q5 1042 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 TMEM150BA6NC51 233 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 BTNL10A8MVZ5 291 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 AP3B1O00203 1094 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ALOX15BO15296 676 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CLOCKO15516 846 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 RHOBTB3O94955 611 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ATP5DP30049 168 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 PEX3P56589 373 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 SELENBP1Q13228 472 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CTTNQ14247 550 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms