RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 SNCBQ16143 134 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 PRPF39Q86UA1 669 aaKnown RBP16.45■□□□□ 0.22
PHTF1-201ENST00000357783 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 APPL2Q8NEU8 664 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 NDRG1Q92597 394 aaKnown RBP16.45■□□□□ 0.22
PHTF1-201ENST00000357783 KCTD15Q96SI1 283 aaPredicted RBP16.45■□□□□ 0.22
PHTF1-201ENST00000357783 ETNK1Q9HBU6 452 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 DNAH12Q6ZR08 3092 aa16.45■□□□□ 0.22
PHTF1-201ENST00000357783 EDF1O60869 148 aaKnown RBP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 MT-ND3P03897 115 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 INHBAP08476 426 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 MYL3P08590 195 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 PSEN2P49810 448 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 TAF6P49848 677 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 KCNJ2P63252 427 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 BEX3Q00994 111 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 FAAP100Q0VG06 881 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 DPYSL2Q16555 572 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 UBXN11Q5T124 520 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 ANKLE1Q8NAG6 615 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 ZNF75CPQ92670 426 aaPredicted RBP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 NCAPGQ9BPX3 1015 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 SLC10A2Q12908 348 aaPredicted RBP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 PCBP1Q15365 356 aaKnown RBP eCLIP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 CDKL3Q8IVW4 592 aaPredicted RBP16.44■□□□□ 0.22
PHTF1-201ENST00000357783 ADGRF2Q8IZF7 708 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 BANPQ8N9N5 519 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 SLC44A1Q8WWI5 657 aa16.44■□□□□ 0.22
PHTF1-201ENST00000357783 CFAP73A6NFT4 308 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 AXLP30530 894 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 CAND1Q86VP6 1230 aaKnown RBP16.43■□□□□ 0.22
PHTF1-201ENST00000357783 VSIG1Q86XK7 387 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 CTAGE3PQ8IX95 158 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 PYROXD2Q8N2H3 581 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 KIF2BQ8N4N8 673 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 CENPIQ92674 756 aaPredicted RBP16.43■□□□□ 0.22
PHTF1-201ENST00000357783 SERAC1Q96JX3 654 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 ALG13Q9NP73 1137 aaKnown RBP16.43■□□□□ 0.22
PHTF1-201ENST00000357783 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 GDAP2Q9NXN4 497 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 ZC3H7BQ9UGR2 993 aaKnown RBP16.43■□□□□ 0.22
PHTF1-201ENST00000357783 MFHAS1Q9Y4C4 1052 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 TTLL3Q9Y4R7 772 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 IQANK1A0A1B0GTG1 560 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
PHTF1-201ENST00000357783 FAM155BO75949 473 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 FAM131BQ86XD5 332 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 ARRDC4Q8NCT1 418 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 FAM149B1Q96BN6 582 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 CSPG4P5Q96PW8 444 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.43■□□□□ 0.22
PHTF1-201ENST00000357783 TRIM33Q9UPN9 1127 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 IPPQ9Y573 584 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
PHTF1-201ENST00000357783 MYO18AQ92614 2054 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 MGRN1O60291 552 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 HUS1O60921 280 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 METTL18O95568 372 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 KCNE1P15382 129 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 PNPLA4P41247 253 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ADAM17P78536 824 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 CCL14Q16627 93 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 SV2CQ496J9 727 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 SLC45A4Q5BKX6 768 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 KCNT2Q6UVM3 1135 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 OTOAQ7RTW8 1153 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 PPM1NQ8N819 430 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 KLHL29Q96CT2 875 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 CLDN5O00501 218 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 XPOTO43592 962 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 LPXNO60711 386 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 SPAG6O75602 509 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ZNF865P0CJ78 1059 aaPredicted RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 NQO1P15559 274 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 GOT1P17174 413 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 AMPD1P23109 780 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ACAT1P24752 427 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ACADSBP45954 432 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ADIGQ0VDE8 80 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ALKBH8Q96BT7 664 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 MYLK2Q9H1R3 596 aa16.42■□□□□ 0.22
PHTF1-201ENST00000357783 ZNF638Q14966 1978 aaKnown RBP16.42■□□□□ 0.22
PHTF1-201ENST00000357783 SYNJ2BP-COX16A0A087WUM0 186 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 ZNF487B1APH4 448 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 F5H423 210 aaPredicted RBP16.41■□□□□ 0.22
PHTF1-201ENST00000357783 TM9SF1O15321 606 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 PYGBP11216 843 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 MORN1Q5T089 497 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 PIGZQ86VD9 579 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 FAM228AQ86W67 206 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 DEFB106AQ8N104 65 aa16.41■□□□□ 0.22
PHTF1-201ENST00000357783 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms