RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 SIKE1Q9BRV8 207 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 DHX35Q9H5Z1 703 aaKnown RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 NDUFA13Q9P0J0 144 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 GOLGB1Q14789 3259 aaKnown RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 C15orf38-AP3S2A0A0A6YYH1 394 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 HDAC4P56524 1084 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 NRF1Q16656 503 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 UGCGQ16739 394 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 ARPINQ7Z6K5 226 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 TMEM161BQ8NDZ6 487 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 S100A14Q9HCY8 104 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 KRT82Q9NSB4 513 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 UQCRBP14927 111 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 KLRC2P26717 231 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 RGS2P41220 211 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 SLC1A6P48664 564 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 MYL6P60660 151 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 CRADDP78560 199 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 PHEXP78562 749 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 TNFAIP8L3Q5GJ75 292 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 KBTBD2Q8IY47 623 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 STKLD1Q8NE28 680 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 PAK5Q9P286 719 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 TLK1Q9UKI8 766 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 RNASEH1O60930 286 aaKnown RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 SPAG6O75602 509 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 DLG1Q12959 904 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 NFIL3Q16649 462 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 KLC3Q6P597 504 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 B3GNT6Q6ZMB0 384 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 LENG1Q96BZ8 264 aaPredicted RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 THAP1Q9NVV9 213 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 PLA2G4CQ9UP65 541 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 DRG1Q9Y295 367 aaKnown RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 IGKV6D-41A0A0C4DH26 115 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 COQ9O75208 318 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 TMEM63AO94886 807 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 UNGP13051 313 aaPredicted RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 ADSSP30520 456 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 PRKCEQ02156 737 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 VWA5B1Q5TIE3 1220 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 HEATR6Q6AI08 1181 aaKnown RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 ZSCAN18Q8TBC5 510 aaPredicted RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 CATSPER2Q96P56 530 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 CISHQ9NSE2 258 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 DGAT1O75907 488 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 ITGAVP06756 1048 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 CD48P09326 243 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 STIP1P31948 543 aaKnown RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 ALDH1A3P47895 512 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 TAP1Q03518 808 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 KRT72Q14CN4 511 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 RPS6KA2Q15349 733 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 PTAR1Q7Z6K3 402 aaPredicted RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 PIWIL2Q8TC59 973 aaKnown RBP12.96□□□□□ -0.33
BDNF-202ENST00000356660 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 GGA3Q9NZ52 723 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 RNF181Q9P0P0 153 aa12.96□□□□□ -0.33
BDNF-202ENST00000356660 CLUHO75153 1309 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 APOL1O14791 398 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 TPST1O60507 370 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 FGFR1P11362 822 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 ABCG1P45844 678 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 RAP1GAPP47736 663 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.34
BDNF-202ENST00000356660 ACTR3P61158 418 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 DMPKQ09013 629 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 CES3Q6UWW8 571 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 MAP4K3Q8IVH8 894 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 SIX6OS1Q8N1H7 587 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 CDRT15Q96T59 188 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 RSAD1Q9HA92 442 aa12.96□□□□□ -0.34
BDNF-202ENST00000356660 RNF103-CHMP3A0A140T963 221 aa12.95□□□□□ -0.34
BDNF-202ENST00000356660 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
BDNF-202ENST00000356660 VIL1P09327 827 aaKnown RBP12.95□□□□□ -0.34
BDNF-202ENST00000356660 MPP3Q13368 585 aa12.95□□□□□ -0.34
BDNF-202ENST00000356660 TBCCQ15814 346 aa12.95□□□□□ -0.34
BDNF-202ENST00000356660 TWF2Q6IBS0 349 aaKnown RBP12.95□□□□□ -0.34
BDNF-202ENST00000356660 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
BDNF-202ENST00000356660 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
BDNF-202ENST00000356660 RBM12BQ8IXT5 1001 aaKnown RBP12.95□□□□□ -0.34
BDNF-202ENST00000356660 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms