RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RRM2P31350 389 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 MFSD10Q14728 455 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 FAM171A1Q5VUB5 890 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 FBXW10Q5XX13 1052 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 COLGALT1Q8NBJ5 622 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 EXD1Q8NHP7 514 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 DNAJC9Q8WXX5 260 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 FBXO44Q9H4M3 255 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 BARX2Q9UMQ3 279 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 SOX13Q9UN79 622 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TSPAN3O60637 253 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TOMM70O94826 608 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 RBP1P09455 135 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 RPS7P62081 194 aaKnown RBP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TTI2Q6NXR4 508 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 FAM9CQ8IZT9 166 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 MARC1Q5VT66 337 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 KIAA2013Q8IYS2 634 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 CASP10Q92851 521 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 KIAA1683Q9H0B3 1180 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 KRT84Q9NSB2 600 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 PADI4Q9UM07 663 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 ACOT9Q9Y305 439 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TARSP26639 723 aaKnown RBP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TBX4P57082 545 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 ANGPT1Q15389 498 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 RETSATQ6NUM9 610 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TFAP2DQ7Z6R9 452 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 XPNPEP3Q9NQH7 507 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 THG1LQ9NWX6 298 aaKnown RBP18.55■□□□□ 0.56
COL18A1-202ENST00000355480 TMCC3Q9ULS5 477 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 DUSP10Q9Y6W6 482 aa18.55■□□□□ 0.56
COL18A1-202ENST00000355480 THRAP10827 490 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 CCND1P24385 295 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 ADGRA1Q86SQ6 560 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 TLK2Q86UE8 772 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 PGLYRP2Q96PD5 576 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 PAFAH2Q99487 392 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 ELOVL6Q9H5J4 265 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 SMPD4Q9NXE4 827 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 HEY2Q9UBP5 337 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 TSPAN16Q9UKR8 245 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 CXCL11O14625 94 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 IL1R1P14778 569 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 TOB1P50616 345 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-202ENST00000355480 NDST1P52848 882 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 TGM3Q08188 693 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 MPP3Q13368 585 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 PLD1Q13393 1074 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 NFYCQ13952 458 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 PTGISQ16647 500 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 ALFQ53S48 1182 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 ERMARDQ5T6L9 678 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 REPS2Q8NFH8 660 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-202ENST00000355480 GTF2A1LQ9UNN4 478 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 FGFR1P11362 822 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 AKR1A1P14550 325 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 SEL1L3Q68CR1 1132 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 OSGEPQ9NPF4 335 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 UTP6Q9NYH9 597 aaKnown RBP18.54■□□□□ 0.56
COL18A1-202ENST00000355480 CPS1P31327 1500 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 FAM205AQ6ZU69 1335 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 NCAM2O15394 837 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 STRNO43815 780 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 ADIGQ0VDE8 80 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 ATP6AP1LQ52LC2 224 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 SLC27A1Q6PCB7 646 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 SLC30A10Q6XR72 485 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 LRRC34Q8IZ02 419 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 EFCAB1Q9HAE3 211 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 VANGL2Q9ULK5 521 aa18.54■□□□□ 0.56
COL18A1-202ENST00000355480 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
COL18A1-202ENST00000355480 MSH3P20585 1137 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ADORA2AP29274 412 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 NFIL3Q16649 462 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 TTC33Q6PID6 262 aaPredicted RBP18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ATXN3LQ9H3M9 355 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 TUBGCP4Q9UGJ1 667 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 RAMP2O60895 175 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 RENBPP51606 427 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 RD3Q7Z3Z2 195 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ACTR8Q9H981 624 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 SNCAIPQ9Y6H5 919 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ERI2A8K979 691 aaKnown RBP18.53■□□□□ 0.56
COL18A1-202ENST00000355480 STAU1O95793 577 aaKnown RBP18.53■□□□□ 0.56
COL18A1-202ENST00000355480 SERPINF2P08697 491 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ZNF23P17027 643 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 FGFR2P21802 821 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 TMEM154Q6P9G4 183 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 TRMT11Q7Z4G4 463 aaKnown RBP18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ABRAQ8N0Z2 381 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 TATDN2Q93075 761 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 DIP2AQ14689 1571 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 FAM47E-STBD1D6RA91 191 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 CHRNB3Q05901 458 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 SGCGQ13326 291 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 SEC23AQ15436 765 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms