RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 LMNB2Q03252 620 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TAF11Q15544 211 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TAF1BQ53T94 588 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 PLEKHG4Q58EX7 1191 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ZFYVE27Q5T4F4 411 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 OTOAQ7RTW8 1153 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF598Q86UK7 904 aaKnown RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 AGGF1Q8N302 714 aaeCLIP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 BEST2Q8NFU1 509 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 MICAL1Q8TDZ2 1067 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 HAUS1Q96CS2 278 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 VWCEQ96DN2 955 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TMEM176AQ96HP8 235 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 NAF1Q96HR8 494 aaKnown RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 SLITRK1Q96PX8 696 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 FAM167BQ9BTA0 163 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 BEGAINQ9BUH8 593 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 CYLDQ9NQC7 956 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 RANBP2P49792 3224 aaKnown RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TCRBV5S1A1TA0A578 114 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 KPNA7A9QM74 516 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 KBTBD13C9JR72 458 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ALOX15BO15296 676 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ITGB1P05556 798 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 CD19P15391 556 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 KRT4P19013 534 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ALDH3A1P30838 453 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF252P-AS1Q0IIN9 211 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 BLMHQ13867 455 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 RNASEH2BQ5TBB1 312 aaKnown RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 CYP4A22Q5TCH4 519 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 KIAA0319Q5VV43 1072 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TXNRD3NBQ6F5E7 133 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 DRICH1Q6PGQ1 229 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 LVRNQ6Q4G3 990 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 CEP128Q6ZU80 1094 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 LIMS2Q7Z4I7 341 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ACOT1Q86TX2 421 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 LONP2Q86WA8 852 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 OSTM1Q86WC4 334 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 PHF13Q86YI8 300 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 RCOR2Q8IZ40 523 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 UBA3Q8TBC4 463 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 FEZF2Q8TBJ5 459 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF75CPQ92670 426 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 ACSF2Q96CM8 615 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 SCLYQ96I15 445 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TMEM121Q9BTD3 319 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 PARVAQ9NVD7 372 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 SENP1Q9P0U3 644 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 BARX2Q9UMQ3 279 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 LRRC42Q9Y546 428 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 SCINQ9Y6U3 715 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 CASTOR2A6NHX0 329 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 F8VP50 259 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 GOLGA8SH3BPF8 625 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 GOLGA8MH3BSY2 632 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 I3L4J1 428 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PIK3R2O00459 728 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PQBP1O60828 265 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF623O75123 536 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 ENTPD5O75356 428 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TJP3O95049 919 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PDGFRBP09619 1106 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 MMP8P22894 467 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CCNHP51946 323 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 GPX6P59796 221 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 GAD2Q05329 585 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PDIA2Q13087 525 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 MORF4L2Q15014 288 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 EFTUD2Q15029 972 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 ARHGEF6Q15052 776 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 OASLQ15646 514 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PTPN20Q4JDL3 420 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PAN2Q504Q3 1202 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PPP1R26Q5T8A7 1209 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TRIM68Q6AZZ1 485 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CAPRIN2Q6IMN6 1127 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 HEXIM2Q96MH2 286 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 NUDCD1Q96RS6 583 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CPXM1Q96SM3 734 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TSPYL2Q9H2G4 693 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 DENND2DQ9H6A0 471 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 NPHS2Q9NP85 383 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 FAM49BQ9NUQ9 324 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TIMM13Q9Y5L4 95 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CDH23Q9H251 3354 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TMEM191CA6NGB0 347 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 C9IYK1 514 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 H0Y3Z8 333 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TRAFD1O14545 582 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 IFNB1P01574 187 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 LRPAP1P30533 357 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 GPD2P43304 727 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 C1QTNF8P60827 252 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 OGDHQ02218 1023 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 414.6 ms