RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 HERC5Q9UII4 1024 aaKnown RBP15.39■□□□□ 0.05
CLCN1-201ENST00000343257 PPME1Q9Y570 386 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 TEX264Q9Y6I9 313 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 PDGFRBP09619 1106 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 EIF2AK2P19525 551 aaKnown RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ABCD1P33897 745 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 CRKP46108 304 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 C16orf72Q14CZ0 275 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 RAB6CQ53S08 254 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 GPAT2Q6NUI2 795 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 TMEM179Q6ZVK1 233 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 USP37Q86T82 979 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 RTKN2Q8IZC4 609 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ADGRF2Q8IZF7 708 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 OXCT2Q9BYC2 517 aaPredicted RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 RAB6CQ9H0N0 254 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 C1orf21Q9H246 121 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 SEMA6AQ9H2E6 1030 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 DBNDD1Q9H9R9 158 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 PI4KBQ9UBF8 816 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 HEY1Q9Y5J3 304 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 WDR64B1ANS9 1081 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 NEMP1O14524 444 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 STAM2O75886 525 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 STAMBPO95630 424 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 YWHAZP63104 245 aaKnown RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 TUBB3Q13509 450 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 DPH6Q7L8W6 267 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 MAP4K3Q8IVH8 894 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 MPP5Q8N3R9 675 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 OR5B17Q8NGF7 314 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 PFDN4Q9NQP4 134 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 THAP1Q9NVV9 213 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 COL20A1Q9P218 1284 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 DMTF1Q9Y222 760 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 TELO2Q9Y4R8 837 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 WNK3Q9BYP7 1800 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 PMM2O15305 246 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 STRNO43815 780 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 FGFR3P22607 806 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 KDELR1P24390 212 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 LIG4P49917 911 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 IDH3AP50213 366 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 WASHC5Q12768 1159 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ANKDD1AQ495B1 522 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 PPM1LQ5SGD2 360 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 N4BP2L1Q5TBK1 243 aaPredicted RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 CPNE9Q8IYJ1 553 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ARFGAP1Q8N6T3 406 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 FAM156AQ8NDB6 213 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ZSCAN18Q8TBC5 510 aaPredicted RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 TBC1D22BQ9NU19 505 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
CLCN1-201ENST00000343257 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
CLCN1-201ENST00000343257 C3orf70A6NLC5 250 aaPredicted RBP15.37■□□□□ 0.05
CLCN1-201ENST00000343257 KCNN4O15554 427 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 KLHL2O95198 593 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 VARSP26640 1264 aaKnown RBP15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ENTPD1P49961 510 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 NUDT2P50583 147 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 CRADDP78560 199 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 LPIN1Q14693 890 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 PGM2L1Q6PCE3 622 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 KCTD17Q8N5Z5 321 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 CEP170P1Q96L14 293 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 RBM38Q9H0Z9 239 aaKnown RBP15.37■□□□□ 0.05
CLCN1-201ENST00000343257 CAAP1Q9H8G2 361 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 FAM198AQ9UFP1 575 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 NFASCO94856 1347 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ARHGAP10A1A4S6 786 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ITGBL1O95965 494 aaPredicted RBP15.37■□□□□ 0.05
CLCN1-201ENST00000343257 FAM58BPP0C7Q3 252 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 CD19P15391 556 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 TEDDM1Q5T9Z0 273 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 LGSNQ5TDP6 509 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 BSPRYQ5W0U4 402 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ITPRIPL1Q6GPH6 555 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ACTRT2Q8TDY3 377 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ATXN7L3BQ96GX2 97 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 GMCL1Q96IK5 515 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 CCT7Q99832 543 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 MRPS26Q9BYN8 205 aaKnown RBP15.37■□□□□ 0.05
CLCN1-201ENST00000343257 Q9H521 79 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 ZNF358Q9NW07 568 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 NR2E3Q9Y5X4 410 aa15.37■□□□□ 0.05
CLCN1-201ENST00000343257 STX16-NPEPL1H3BU86 382 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 SNNO75324 88 aaPredicted RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 LRCH4O75427 683 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CDH15P55291 814 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 NAA20P61599 178 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ROR1Q01973 937 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 SFSWAPQ12872 951 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 OGFRL1Q5TC84 451 aaPredicted RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ANGEL2Q5VTE6 544 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 B3GNT9Q6UX72 402 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ZNF410Q86VK4 478 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 C10orf107Q8IVU9 208 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 MARVELD2Q8N4S9 558 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms