RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 POPDC2Q9HBU9 364 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NGRNQ9NPE2 291 aaKnown RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 H7C0C1 242 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SPTLC1O15269 473 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DYNC1LI2O43237 492 aaPredicted RBP11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KRT4P19013 534 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FDFT1P37268 417 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ELK3P41970 407 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ETV4P43268 484 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ATP5OP48047 213 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GAD2Q05329 585 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CDK18Q07002 472 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 HIC1Q14526 733 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CAND1Q86VP6 1230 aaKnown RBP11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC26A11Q86WA9 606 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CCNJLQ8IV13 435 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SCML4Q8N228 414 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SMG8Q8ND04 991 aaKnown RBP11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TMEM40Q8WWA1 233 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NTAN1Q96AB6 310 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CSPG4P5Q96PW8 444 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ABCF3Q9NUQ8 709 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC38A7Q9NVC3 462 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FZD10Q9ULW2 581 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TTLL3Q9Y4R7 772 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SCN10AQ9Y5Y9 1956 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KCNN4O15554 427 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FBXO21O94952 628 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CA4P22748 312 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CNTFP26441 200 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RBL1P28749 1068 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NOS2P35228 1153 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GLUD2P49448 558 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RGS7P49802 495 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 LILRA4P59901 499 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ADCY1Q08828 1119 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SCAPQ12770 1279 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DNAJC3Q13217 504 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NAB1Q13506 487 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 BBS9Q3SYG4 887 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 STEAP4Q687X5 459 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RAB3IL1Q8TBN0 382 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 APOPT1Q96IL0 206 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NPY6RQ99463 290 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RAB6BQ9NRW1 208 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RRN3Q9NYV6 651 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 AP4E1Q9UPM8 1137 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 IPPQ9Y573 584 aa11.12□□□□□ -0.63
TRAF3IP2-201ENST00000340026 C17orf102A2RUQ5 167 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 HNRNPCL1O60812 293 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 HUS1O60921 280 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DCTN3O75935 186 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PSMC4P43686 418 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 HCAR3P49019 387 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC8A3P57103 927 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NCALDP61601 193 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FRG1Q14331 258 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC1A5Q15758 541 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CA9Q16790 459 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RAB6CQ53S08 254 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 STXBP5Q5T5C0 1151 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 LGSNQ5TDP6 509 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TTC39BQ5VTQ0 682 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NCBP2-AS2Q69YL0 99 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TIFABQ6ZNK6 161 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ADGRF2Q8IZF7 708 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 B3GALNT2Q8NCR0 500 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GDAP1Q8TB36 358 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RAB6CQ9H0N0 254 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GRID1Q9ULK0 1009 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PIN4Q9Y237 131 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 UTRNP46939 3433 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 A0A1W2PPM1 405 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GOLGA8MH3BSY2 632 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 C2CD2LO14523 706 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CHUKO15111 745 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 UBOX5O94941 541 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NPR3P17342 541 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MRPS5P82675 430 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ATP11AP98196 1134 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PAFAH1B3Q15102 231 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PRKD1Q15139 912 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZNF534Q76KX8 674 aa11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP2-201ENST00000340026 IGDCC3Q8IVU1 814 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms