RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 JUPP14923 745 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 ITIH2P19823 946 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 SDSP20132 328 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 PMLP29590 882 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 SERPINB5P36952 375 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 MAPK8P45983 427 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 QARSP47897 775 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 FLT3LGP49771 235 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 PSEN2P49810 448 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 EFNA5P52803 228 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 IL1RL1Q01638 556 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 NCAPHQ15003 741 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 CARTPTQ16568 116 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 FSCN1Q16658 493 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 PRR5LQ6MZQ0 368 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 ZCCHC8Q6NZY4 707 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 FBXO42Q6P3S6 717 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 PACS1Q6VY07 963 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 RBM23Q86U06 439 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 CAND1Q86VP6 1230 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 RHPN2Q8IUC4 686 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 CDKL3Q8IVW4 592 aaPredicted RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 ANKLE1Q8NAG6 615 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF75CPQ92670 426 aaPredicted RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 UBE2E3Q969T4 207 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 SPATA5L1Q9BVQ7 753 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 PPANQ9NQ55 473 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 MCUBQ9NWR8 336 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 RABGEF1Q9UJ41 708 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 PCDHGC5Q9Y5F6 944 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 RBM8AQ9Y5S9 174 aaKnown RBP3.39□□□□□ -1.87
CSMD3-202ENST00000339701 BTAF1O14981 1849 aa3.39□□□□□ -1.87
CSMD3-202ENST00000339701 CCT8L1PA6NM43 557 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 SNPHO15079 494 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TRIM24O15164 1050 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ITGAVP06756 1048 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 CCDC166P0CW27 439 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PSMC1P62191 440 aaKnown RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 POLD3Q15054 466 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 UAP1Q16222 522 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 CASC4Q6P4E1 433 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 SYCE2Q6PIF2 218 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 LPCAT2Q7L5N7 544 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 FAM83AQ86UY5 434 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PLEKHM2Q8IWE5 1019 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 SMYD4Q8IYR2 804 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ZMYND12Q9H0C1 365 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 RGS18Q9NS28 235 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 A0A0D9SFI3 127 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ERCC1P07992 297 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 CNPP09543 421 aaKnown RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TSHRP16473 764 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TOP3AQ13472 1001 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 KYNUQ16719 465 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 FIGNQ5HY92 759 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TTC38Q5R3I4 469 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 FAM26FQ5R3K3 315 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 SULT1C3Q6IMI6 304 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 RP9Q8TA86 221 aaKnown RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 DCUN1D1Q96GG9 259 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF594Q96JF6 807 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TGS1Q96RS0 853 aaKnown RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 SEPT5Q99719 369 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 MYL10Q9BUA6 226 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 RAD18Q9NS91 495 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ASNSD1Q9NWL6 643 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ANAPC7Q9UJX3 599 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 GSTK1Q9Y2Q3 226 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 NEMP2A6NFY4 417 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 H3BRJ5 948 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TBX3O15119 743 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 RASA4O43374 803 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 GLP2RO95838 553 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 F9P00740 461 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 RPN2P04844 631 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PCNAP12004 261 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PPIBP23284 216 aaKnown RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PPP2R1BP30154 601 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 XRCC4Q13426 336 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PTK6Q13882 451 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ARHGAP44Q17R89 818 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 LONRF2Q1L5Z9 754 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 CDC73Q6P1J9 531 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 IYDQ6PHW0 289 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 SMIM5Q71RC9 77 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 PDPRQ8NCN5 879 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ATP6V1E2Q96A05 226 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 HDAC11Q96DB2 347 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF518BQ9C0D4 1074 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 DMAP1Q9NPF5 467 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 AVENQ9NQS1 362 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 STAP2Q9UGK3 403 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 KLF15Q9UIH9 416 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 MAGED1Q9Y5V3 778 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 GRIN2DO15399 1336 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 HNRNPDLO14979 420 aaKnown RBP3.38□□□□□ -1.87
CSMD3-202ENST00000339701 TNFAIP8O95379 198 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 HMBSP08397 361 aa3.38□□□□□ -1.87
CSMD3-202ENST00000339701 OR52Z1P0C646 297 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms