RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 MSANTD2Q6P1R3 559 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 MAB21L3Q8N8X9 362 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 SLC35G2Q8TBE7 412 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 RXFP2Q8WXD0 754 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 NUP85Q9BW27 656 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 TASP1Q9H6P5 420 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 OSGEPQ9NPF4 335 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 CALCOCO1Q9P1Z2 691 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 PYCARDQ9ULZ3 195 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
CHGA-202ENST00000334654 SCINQ9Y6U3 715 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 SOBPA7XYQ1 873 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 MDM4O15151 490 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 IPO7O95373 1038 aaKnown RBP18.29■□□□□ 0.52
CHGA-202ENST00000334654 RALAP11233 206 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 NCAM1P13591 858 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 NOS2P35228 1153 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 SMAD4Q13485 552 aaKnown RBP18.29■□□□□ 0.52
CHGA-202ENST00000334654 DCAF6Q58WW2 860 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 GPR158Q5T848 1215 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 KLHDC10Q6PID8 442 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 BNIPLQ7Z465 357 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 NPAS3Q8IXF0 933 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 ARL14EPQ8N8R7 260 aaPredicted RBP18.29■□□□□ 0.52
CHGA-202ENST00000334654 RFFLQ8WZ73 363 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 FGF13Q92913 245 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 GCNAQ96QF7 691 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 NPY6RQ99463 290 aa18.29■□□□□ 0.52
CHGA-202ENST00000334654 MRPL47Q9HD33 250 aaKnown RBP18.29■□□□□ 0.52
CHGA-202ENST00000334654 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHGA-202ENST00000334654 HELZP42694 1942 aaKnown RBP18.29■□□□□ 0.52
CHGA-202ENST00000334654 BTNL10A8MVZ5 291 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 MTA2O94776 668 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 IGLV3-25P01717 112 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 DDX6P26196 483 aaKnown RBP eCLIP18.28■□□□□ 0.52
CHGA-202ENST00000334654 ZXDBP98169 803 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 CCDC14Q49A88 953 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 DQX1Q8TE96 717 aaKnown RBP18.28■□□□□ 0.52
CHGA-202ENST00000334654 GOLGA1Q92805 767 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 ZFRQ96KR1 1074 aaKnown RBP18.28■□□□□ 0.52
CHGA-202ENST00000334654 CFAP57Q96MR6 1250 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 NECTIN4Q96NY8 510 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 MYADMQ96S97 322 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 LUC7LQ9NQ29 371 aaKnown RBP18.28■□□□□ 0.52
CHGA-202ENST00000334654 UVRAGQ9P2Y5 699 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 TRIM10Q9UDY6 481 aa18.28■□□□□ 0.52
CHGA-202ENST00000334654 NUP210Q8TEM1 1887 aaPredicted RBP18.28■□□□□ 0.52
CHGA-202ENST00000334654 A0A0A6YYK5 440 aaPredicted RBP18.27■□□□□ 0.52
CHGA-202ENST00000334654 DPYSL4O14531 572 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 PDGFRAP16234 1089 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 PFKLP17858 780 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 HDCP19113 662 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 ATP5C1P36542 298 aaKnown RBP18.27■□□□□ 0.52
CHGA-202ENST00000334654 ARHGAP25P42331 645 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 TFF2Q03403 129 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 RAB6CQ53S08 254 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 C10orf120Q5SQS8 335 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 SH3PXD2AQ5TCZ1 1133 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 GET4Q7L5D6 327 aaPredicted RBP18.27■□□□□ 0.52
CHGA-202ENST00000334654 CMTM8Q8IZV2 173 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 ZNF564Q8TBZ8 553 aaPredicted RBP18.27■□□□□ 0.52
CHGA-202ENST00000334654 CENPIQ92674 756 aaPredicted RBP18.27■□□□□ 0.52
CHGA-202ENST00000334654 BTBD6Q96KE9 485 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 TRIM62Q9BVG3 475 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 RAB6CQ9H0N0 254 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 TRPC7Q9HCX4 862 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 OLA1Q9NTK5 396 aaKnown RBP18.27■□□□□ 0.52
CHGA-202ENST00000334654 CTTNBP2NLQ9P2B4 639 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 SFMBT1Q9UHJ3 866 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 PPP2R2CQ9Y2T4 447 aa18.27■□□□□ 0.52
CHGA-202ENST00000334654 CAPN9O14815 690 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 ENDOD1O94919 500 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 CCDC175P0C221 793 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 GPD1P21695 349 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 WEE1P30291 646 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 PTPN9P43378 593 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 ZNF143P52747 638 aaPredicted RBP18.26■□□□□ 0.51
CHGA-202ENST00000334654 HADHBP55084 474 aaKnown RBP18.26■□□□□ 0.51
CHGA-202ENST00000334654 SLC7A9P82251 487 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 EFEMP1Q12805 493 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 C15orf59Q2T9L4 293 aaPredicted RBP18.26■□□□□ 0.51
CHGA-202ENST00000334654 SLC25A52Q3SY17 297 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 ARHGAP15Q53QZ3 475 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 ZNF662Q6ZS27 426 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 KIAA1328Q86T90 577 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 TAC4Q86UU9 113 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 RHOT2Q8IXI1 618 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 ADAM32Q8TC27 787 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 ADAMTS19Q8TE59 1207 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 FNIP1Q8TF40 1166 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 RNF139Q8WU17 664 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 CDK5RAP1Q96SZ6 601 aaKnown RBP18.26■□□□□ 0.51
CHGA-202ENST00000334654 TBCBQ99426 244 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 KLF16Q9BXK1 252 aaPredicted RBP18.26■□□□□ 0.51
CHGA-202ENST00000334654 SMOC2Q9H3U7 446 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 CDH7Q9ULB5 785 aa18.26■□□□□ 0.51
CHGA-202ENST00000334654 TRUB2O95900 331 aaKnown RBP18.26■□□□□ 0.51
CHGA-202ENST00000334654 SMAD2Q15796 467 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms