RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DDX12PQ92771 950 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FGF14Q92915 247 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ISG20Q96AZ6 181 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 DMRTB1Q96MA1 342 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZFP3Q96NJ6 502 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 BDH2Q9BUT1 245 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PRDM13Q9H4Q3 707 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RSAD1Q9HA92 442 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 JKAMPQ9P055 326 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 STRIP2Q9ULQ0 834 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TNFSF13BQ9Y275 285 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 C2CD2Q9Y426 696 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PCDHB3Q9Y5E6 796 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TRPM6Q9BX84 2022 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 A0A1W2PPC4 97 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 A0A1W2PQF6 199 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ASPDHA6ND91 283 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TRABD2BA6NFA1 517 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GSG1L2A8MUP6 293 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ABLIM1O14639 778 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 MEIS2O14770 477 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RPS6KA5O75582 802 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RFPL1O75677 317 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SEMA3DO95025 777 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 MBD4O95243 580 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 IGLV3-27P01718 113 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 EPCAMP16422 314 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GOT1P17174 413 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GLDCP23378 1020 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 MSX1P28360 303 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RPS6P62753 249 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RPL10AP62906 217 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NFKB2Q00653 900 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CDC20Q12834 499 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FOXC1Q12948 553 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 EIF4EBP2Q13542 120 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ALCAMQ13740 583 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 IL11RAQ14626 422 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ISXQ2M1V0 245 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SLC25A35Q3KQZ1 300 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 AGAP9Q5VTM2 703 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TMEM211Q6ICI0 200 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FIGLAQ6QHK4 219 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SLC30A10Q6XR72 485 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NEK10Q6ZWH5 1172 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF765Q7L2R6 523 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ARCQ7LC44 396 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 C14orf80Q86SX3 495 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SGMS1Q86VZ5 419 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SLITRK4Q8IW52 837 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZC3H3Q8IXZ2 948 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 BMPERQ8N8U9 685 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 OR4D9Q8NGE8 314 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 DENND1AQ8TEH3 1009 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 EZH1Q92800 747 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FKBP10Q96AY3 582 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PLD4Q96BZ4 506 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 VPS50Q96JG6 964 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FEM1CQ96JP0 617 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 DMRTA2Q96SC8 542 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF747Q9BV97 191 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TRIM62Q9BVG3 475 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ADGRE3Q9BY15 652 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ADAM19Q9H013 955 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RNPEPQ9H4A4 650 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 AGO3Q9H9G7 860 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CSNK1G1Q9HCP0 422 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SERINC1Q9NRX5 453 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NRBP2Q9NSY0 501 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 HCN2Q9UL51 889 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ST3GAL5Q9UNP4 418 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CLCA2Q9UQC9 943 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NOC2LQ9Y3T9 749 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GVINP1Q7Z2Y8 2422 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CREBBPQ92793 2442 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CEP290O15078 2479 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 A0A1B0GUS0 222 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 LILRA5A6NI73 299 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ELOA3DA6NLF2 546 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GCOM1H8Y6P7 765 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 HYAL3O43820 417 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PRKRAO75569 313 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF189O75820 626 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RTN3O95197 1032 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 APODP05090 189 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RHOP08100 348 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 HMOX1P09601 288 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 POLR2MP0CAP2 368 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RARAP10276 462 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NME1P15531 152 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 BMP6P22004 513 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NTSR1P30989 418 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 LIMS1P48059 325 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RFX3P48380 749 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 KHKP50053 298 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GPLD1P80108 840 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 MEF2AQ02078 507 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 GBE1Q04446 702 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TFF3Q07654 80 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ELOA3BQ3SY89 546 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms