RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IRAK3Q9Y616 596 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CACNA1DQ01668 2161 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 C1orf232A0A0U1RR37 186 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 H3BRB1 525 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NR5A2O00482 541 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 HNF4AP41235 474 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PPP2R2AP63151 447 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 METTL4Q8N3J2 472 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 C9orf43Q8TAL5 461 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NLNQ9BYT8 704 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZMYND12Q9H0C1 365 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 OSBPL3Q9H4L5 887 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 FKBP7Q9Y680 259 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SPOPO43791 374 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 HMGN1P05114 100 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 HOXB8P17481 243 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NFKBIAP25963 317 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TKTP29401 623 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TXKP42681 527 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PPIL2Q13356 520 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CAMK2DQ13557 499 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 AGERQ15109 404 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 KBTBD6Q86V97 674 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 GIPC3Q8TF64 312 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SKA2Q8WVK7 121 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PROX1Q92786 737 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZSWIM6Q9HCJ5 1215 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF215Q9UL58 517 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 HSPB11Q9Y547 144 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RTL1A6NKG5 1358 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TNKSO95271 1327 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 MEI4A8MW99 385 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRSS44E7EML9 344 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 DDX39AO00148 427 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 EXOC3O60645 756 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 COQ9O75208 318 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR7A10O76100 309 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CYP11B2P19099 503 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLCO1A2P46721 670 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC3A1Q07837 685 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 VAC14Q08AM6 782 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMEM53Q6P2H8 277 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NEK9Q8TD19 979 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBASH3BQ8TF42 649 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SHCBP1LQ9BZQ2 653 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM9Q9C026 710 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NT5MQ9NPB1 228 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 EIF2B4Q9UI10 523 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 USP16Q9Y5T5 823 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADGRL2O95490 1459 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RHPN2P1A8MT19 583 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 INPP4BO15327 924 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PHF2O75151 1096 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 REM1O75628 298 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCNKO75909 580 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 AP2A2O94973 939 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARIH2O95376 493 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM58BPP0C7Q3 252 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NAT1P18440 290 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARR3P36575 388 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 HADHAP40939 763 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ABCG1P45844 678 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 POLA2Q14181 598 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 Q3ZCU0 254 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 C10orf62Q5T681 223 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM92BQ6ZTR7 304 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 METTL3Q86U44 580 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 GCOM2Q9BZD3 368 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SH3GLB2Q9NR46 395 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CFAP97Q9P2B7 532 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ACSL5Q9ULC5 683 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CDY2AQ9Y6F7 541 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC188H7C350 402 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CFLARO15519 480 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 IPO13O94829 963 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CALB2P22676 271 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NR1H2P55055 460 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 BIDP55957 195 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCZ1BP86790 482 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCZ1P86791 482 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RNF151Q2KHN1 245 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAP1GAP2Q684P5 730 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 STYK1Q6J9G0 422 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM67Q6ZTA4 783 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 GALNT7Q86SF2 657 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NMD3Q96D46 503 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCED1AQ9H1Q7 454 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 H2AFY2Q9P0M6 372 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARMCX3Q9UH62 379 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SUGT1Q9Y2Z0 365 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHA2Q9Y5H9 948 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PFKFB2O60825 505 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAB3BP20337 219 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RRM1P23921 792 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRKCQQ04759 706 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RWDD4Q6NW29 188 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms