RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PDK2Q15119 407 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 RNF43Q68DV7 783 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 TRMT10BQ6PF06 316 aaKnown RBP19.65■□□□□ 0.74
RFTN1-201ENST00000334133 RFWD2Q8NHY2 731 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 PAK5Q9P286 719 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 CBX6O95503 412 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 DARSP14868 501 aaKnown RBP19.65■□□□□ 0.74
RFTN1-201ENST00000334133 BSPRYQ5W0U4 402 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 KCNT2Q6UVM3 1135 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 CDHR3Q6ZTQ4 885 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 CTU1Q7Z7A3 348 aaKnown RBP19.65■□□□□ 0.74
RFTN1-201ENST00000334133 UNC5BQ8IZJ1 945 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 ARRDC4Q8NCT1 418 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 LRRC37BQ96QE4 947 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 KCTD15Q96SI1 283 aaPredicted RBP19.65■□□□□ 0.74
RFTN1-201ENST00000334133 PLAC1Q9HBJ0 212 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 SMYD2Q9NRG4 433 aa19.65■□□□□ 0.74
RFTN1-201ENST00000334133 NDC80O14777 642 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 STAU1O95793 577 aaKnown RBP19.64■□□□□ 0.73
RFTN1-201ENST00000334133 NDUFV1P49821 464 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 PLEKHH3Q7Z736 793 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 ZFP42Q96MM3 310 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 PGLYRP2Q96PD5 576 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 LGMNQ99538 433 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 SLC13A1Q9BZW2 595 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 SNX25Q9H3E2 840 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 SLC17A6Q9P2U8 582 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 ZSWIM8A7E2V4 1837 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 LOC102724159A0A0B4J2E5 919 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 A0A0G2JND7 137 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 MEIS3P2A8K0S8 358 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 TRIM49D1C9J1S8 452 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 BEST1O76090 585 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 GRB14Q14449 540 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 PWP2Q15269 919 aaKnown RBP19.64■□□□□ 0.73
RFTN1-201ENST00000334133 CCL14Q16627 93 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 OLFML2BQ68BL8 750 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 SLC9A4Q6AI14 798 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 FLRT1Q9NZU1 646 aa19.64■□□□□ 0.73
RFTN1-201ENST00000334133 ZWINTO95229 277 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 TOP3BO95985 862 aaKnown RBP19.63■□□□□ 0.73
RFTN1-201ENST00000334133 DENND5BQ6ZUT9 1274 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 NT5DC4Q86YG4 428 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 SLC44A1Q8WWI5 657 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 GRAMD1AQ96CP6 724 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 L3MBTL3Q96JM7 780 aaPredicted RBP19.63■□□□□ 0.73
RFTN1-201ENST00000334133 MECRQ9BV79 373 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 KLC2Q9H0B6 622 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 PLEKHA5Q9HAU0 1116 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 MTMR10Q9NXD2 777 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 CHADO15335 359 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 BGNP21810 368 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 GTF2A2P52657 109 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 ADIGQ0VDE8 80 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 SETDB1Q15047 1291 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 STILQ15468 1287 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 TP53INP2Q8IXH6 220 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 ZNF276Q8N554 614 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 ADAM32Q8TC27 787 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 TTLL3Q9Y4R7 772 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 USH1CQ9Y6N9 552 aa19.63■□□□□ 0.73
RFTN1-201ENST00000334133 DPYSL4O14531 572 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 MYL3P08590 195 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 BST2Q10589 180 aaKnown RBP19.62■□□□□ 0.73
RFTN1-201ENST00000334133 DCAF6Q58WW2 860 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 DEFB106AQ8N104 65 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 GBP7Q8N8V2 638 aaPredicted RBP19.62■□□□□ 0.73
RFTN1-201ENST00000334133 C10orf82Q8WW14 230 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 CSPG4P5Q96PW8 444 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 POPDC2Q9HBU9 364 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 TGM2P21980 687 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 NME3Q13232 169 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 SNX17Q15036 470 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 MTDHQ86UE4 582 aaKnown RBP19.62■□□□□ 0.73
RFTN1-201ENST00000334133 OSTM1Q86WC4 334 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 ANKRD52Q8NB46 1076 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 MANSC1Q9H8J5 431 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 SEPT10Q9P0V9 454 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 UBQLN1Q9UMX0 589 aaKnown RBP19.62■□□□□ 0.73
RFTN1-201ENST00000334133 TIMM13Q9Y5L4 95 aaPredicted RBP19.62■□□□□ 0.73
RFTN1-201ENST00000334133 IQANK1A0A1B0GTG1 560 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 AFF1P51825 1210 aaKnown RBP19.62■□□□□ 0.73
RFTN1-201ENST00000334133 ALKAL1Q6UXT8 129 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 TLK2Q86UE8 772 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 PIGZQ86VD9 579 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 TTC39CQ8N584 583 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 APPL2Q8NEU8 664 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 IL1RAPL1Q9NZN1 696 aa19.62■□□□□ 0.73
RFTN1-201ENST00000334133 CCDC195A0A1B0GUA6 201 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 CFAP73A6NFT4 308 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 CREB3O43889 395 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 UNC5CO95185 931 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 CSH1P0DML2 217 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 CSH2P0DML3 217 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 IRX4P78413 519 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 MFSD10Q14728 455 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 TAF1BQ53T94 588 aaPredicted RBP19.61■□□□□ 0.73
RFTN1-201ENST00000334133 MROH9Q5TGP6 573 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 IQSEC1Q6DN90 963 aa19.61■□□□□ 0.73
RFTN1-201ENST00000334133 LRRC52Q8N7C0 313 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms