RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ZFP42Q96MM3 310 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 ETNK1Q9HBU6 452 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 ETNK2Q9NVF9 386 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 PHTF1Q9UMS5 762 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 MFHAS1Q9Y4C4 1052 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 NR2E3Q9Y5X4 410 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 CFAP69A5D8W1 941 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 IGF2BP3O00425 579 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 CLDN5O00501 218 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 HUS1O60921 280 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 ACAT1P24752 427 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 ADRA1DP25100 572 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 LILRA4P59901 499 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 XKR4Q5GH76 650 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 TWF2Q6IBS0 349 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 PRPF39Q86UA1 669 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 FAM131BQ86XD5 332 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 ECHDC2Q86YB7 292 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 KLC2Q9H0B6 622 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 KLHL14Q9P2G3 628 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 WDR91A4D1P6 747 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 GBP2P32456 591 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 PNPLA4P41247 253 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 ADIGQ0VDE8 80 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 PTK7Q13308 1070 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 GALNTL6Q49A17 601 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 PIGZQ86VD9 579 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 CAND1Q86VP6 1230 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 VSIG1Q86XK7 387 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 B3GALNT2Q8NCR0 500 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 TCP10LQ8TDR4 215 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 LRRC8CQ8TDW0 803 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 FAM149B1Q96BN6 582 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 CSPG4P5Q96PW8 444 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 SLC17A7Q9P2U7 560 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 BRCA2P51587 3418 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 MYO18AQ92614 2054 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 ZNF236Q9UL36 1845 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 SYNJ2BP-COX16A0A087WUM0 186 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 C17orf102A2RUQ5 167 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 MEIS3P2A8K0S8 358 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 XPOTO43592 962 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 METTL18O95568 372 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 TSHRP16473 764 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 GOT1P17174 413 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 RPL34P49207 117 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 CPT1AP50416 773 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 PITX1P78337 314 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 SV2CQ496J9 727 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 NETO2Q8NC67 525 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 TRIM56Q9BRZ2 755 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 COX16Q9P0S2 106 aa15.42■□□□□ 0.06
CLCNKA-201ENST00000331433 FAM155BO75949 473 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 BEST1O76090 585 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 ZWINTO95229 277 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 AMPD1P23109 780 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 CRYBB1P53674 252 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 NCALDP61601 193 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 FAAP100Q0VG06 881 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 KCNT2Q6UVM3 1135 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 RGS9BPQ6ZS82 235 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 LIMS2Q7Z4I7 341 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 TBC1D1Q86TI0 1168 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 CDKL3Q8IVW4 592 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 DEFB106AQ8N104 65 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 BANPQ8N9N5 519 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 GRAMD1AQ96CP6 724 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 NCAPGQ9BPX3 1015 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 AP5M1Q9H0R1 490 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 ECT2Q9H8V3 914 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 RXFP1Q9HBX9 757 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 SSU72Q9NP77 194 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 TMPRSS4Q9NRS4 437 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 IKBKGQ9Y6K9 419 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 F5H423 210 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 PTGESO14684 152 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 INHBAP08476 426 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 ACADSBP45954 432 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 RABGGTBP53611 331 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 SLC45A4Q5BKX6 768 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 SLC44A1Q8WWI5 657 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 SERAC1Q96JX3 654 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 TNIP3Q96KP6 325 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 PLCD4Q9BRC7 762 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 PLAC1Q9HBJ0 212 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 POPDC2Q9HBU9 364 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 STARD13Q9Y3M8 1113 aa15.41■□□□□ 0.06
CLCNKA-201ENST00000331433 EDF1O60869 148 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 MT-ND3P03897 115 aa15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 MATKP42679 507 aa15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 NDUFV1P49821 464 aa15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 SULT1E1P49888 294 aa15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 BNIP1Q12981 228 aa15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 SEPT7Q16181 437 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 DCAF6Q58WW2 860 aa15.4■□□□□ 0.06
CLCNKA-201ENST00000331433 WSCD1Q658N2 575 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms