RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CCDC110Q8TBZ0 833 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 THOC1Q96FV9 657 aaKnown RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 MAGEB5Q9BZ81 275 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 DHX35Q9H5Z1 703 aaKnown RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 TTLL3Q9Y4R7 772 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 IQANK1A0A1B0GTG1 560 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 HGSO14964 777 aaPredicted RBP15.12■□□□□ 0.01
TPM3-206ENST00000330188 CHUKO15111 745 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 GBE1Q04446 702 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 FAAP100Q0VG06 881 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
TPM3-206ENST00000330188 SNX17Q15036 470 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 XKR4Q5GH76 650 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 UBXN11Q5T124 520 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 LIMS2Q7Z4I7 341 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 CDKL3Q8IVW4 592 aaPredicted RBP15.12■□□□□ 0.01
TPM3-206ENST00000330188 CFAP36Q96G28 342 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 KCTD15Q96SI1 283 aaPredicted RBP15.12■□□□□ 0.01
TPM3-206ENST00000330188 C12orf65Q9H3J6 166 aaKnown RBP15.12■□□□□ 0.01
TPM3-206ENST00000330188 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 ETNK1Q9HBU6 452 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 POPDC2Q9HBU9 364 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 CYLDQ9NQC7 956 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 SLC5A4Q9NY91 659 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 SLC17A7Q9P2U7 560 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 AP4E1Q9UPM8 1137 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 USH1CQ9Y6N9 552 aa15.12■□□□□ 0.01
TPM3-206ENST00000330188 IGF2BP3O00425 579 aaKnown RBP eCLIP15.11■□□□□ 0.011e-7■■■■□ 23.3
TPM3-206ENST00000330188 ECM2O94769 699 aaPredicted RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 MT-ND3P03897 115 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 INHBAP08476 426 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 ALADP13716 330 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 KCNE1P15382 129 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SOX4Q06945 474 aaPredicted RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 SLC45A4Q5BKX6 768 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SWT1Q5T5J6 900 aaKnown RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 ASRGL1Q7L266 308 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 OTOAQ7RTW8 1153 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 PRPF39Q86UA1 669 aaKnown RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 CCDC185Q8N715 623 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SLC2A14Q8TDB8 520 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 LENG1Q96BZ8 264 aaPredicted RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 SERAC1Q96JX3 654 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SNX25Q9H3E2 840 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 PLAC1Q9HBJ0 212 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 GTF2IRD1Q9UHL9 959 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 ATP6V1G2O95670 118 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 APRTP07741 180 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 CCNB1P14635 433 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 PNPLA4P41247 253 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SKIV2L2P42285 1042 aaKnown RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 ACADSBP45954 432 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 TAF6P49848 677 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SLC18A2Q05940 514 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SEPT7Q16181 437 aaKnown RBP15.11■□□□□ 0.01
TPM3-206ENST00000330188 OLFML2BQ68BL8 750 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 SH2D5Q6ZV89 423 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 TLK2Q86UE8 772 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 MCUQ8NE86 351 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 C10orf82Q8WW14 230 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 KLHL29Q96CT2 875 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 HSFY1Q96LI6 401 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 MYLK2Q9H1R3 596 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 CHKBQ9Y259 395 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 IKBKGQ9Y6K9 419 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 DOCK3Q8IZD9 2030 aa15.11■□□□□ 0.01
TPM3-206ENST00000330188 HAS3O00219 553 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 TREHO43280 583 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
TPM3-206ENST00000330188 GCATO75600 419 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 ZFXP17010 805 aaPredicted RBP15.1■□□□□ 0.01
TPM3-206ENST00000330188 TKTP29401 623 aaKnown RBP15.1■□□□□ 0.01
TPM3-206ENST00000330188 PSEN2P49810 448 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 NEK3P51956 506 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 SPRYD7Q5W111 196 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 C4orf22Q6V702 233 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 APPL2Q8NEU8 664 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 CSPG4P5Q96PW8 444 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 ARHGEF3Q9NR81 526 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
TPM3-206ENST00000330188 FLRT1Q9NZU1 646 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 ZC3H7BQ9UGR2 993 aaKnown RBP15.1■□□□□ 0.01
TPM3-206ENST00000330188 USP3Q9Y6I4 520 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 WDR91A4D1P6 747 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 LPXNO60711 386 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 METTL18O95568 372 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 MAGEA3P43357 314 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 SV2CQ496J9 727 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 MORN1Q5T089 497 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 NCBP2-AS2Q69YL0 99 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 ZNF534Q76KX8 674 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 STRADAQ7RTN6 431 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 SLC26A11Q86WA9 606 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 OSTM1Q86WC4 334 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 ADGRF2Q8IZF7 708 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 MAGEC3Q8TD91 643 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 APOPT1Q96IL0 206 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms