RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PROZP22891 400 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 BCAR1P56945 870 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 GJC2Q5T442 439 aaPredicted RBP18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 UNC5AQ6ZN44 842 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 LRRC74BQ6ZQY2 392 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 SCUBE3Q8IX30 993 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 DNERQ8NFT8 737 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 STMN2Q93045 179 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 PPP1R12CQ9BZL4 782 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 MIS12Q9H081 205 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 HMX2A2RU54 273 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 ACKR2O00590 384 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 LYPLA1O75608 230 aaPredicted RBP18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 ADORA2AP29274 412 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 STIP1P31948 543 aaKnown RBP18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 VHLP40337 213 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 EFCAB12Q6NXP0 572 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 METTL7BQ6UX53 244 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 NDUFAF2Q8N183 169 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 PHC3Q8NDX5 983 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 TRPM4Q8TD43 1214 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 E2F7Q96AV8 911 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 SHCBP1LQ9BZQ2 653 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 ETNK2Q9NVF9 386 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 PLLPQ9Y342 182 aa18.02■□□□□ 0.48
PTP4A3-201ENST00000329397 CEP350Q5VT06 3117 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 E7ENQ6 273 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 I3L4J1 428 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 HCRTO43612 131 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 SNRPAP09012 282 aaKnown RBP18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 GBE1Q04446 702 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 CCDC14Q49A88 953 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 THEMIS2Q5TEJ8 643 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 FBXO16Q8IX29 292 aaPredicted RBP18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 KCNN1Q92952 543 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 KLRG1Q96E93 195 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 CNPY3Q9BT09 278 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 WDR35Q9P2L0 1181 aa18.02■□□□□ 0.47
PTP4A3-201ENST00000329397 SLC15A5A6NIM6 579 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 USP1O94782 785 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 ACADSP16219 412 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 KLC1Q07866 573 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 MXD4Q14582 209 aaPredicted RBP18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 RNF220Q5VTB9 566 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 NUDCD3Q8IVD9 361 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 FAM172AQ8WUF8 416 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 RILPQ96NA2 401 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 GPR20Q99678 358 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 THTPAQ9BU02 230 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 SNRNP25Q9BV90 132 aaKnown RBP18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 CEP41Q9BYV8 373 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 FRMD8P1Q9BZ68 369 aaPredicted RBP18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 ZNF112Q9UJU3 913 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 SCN1AP35498 2009 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 PRR5-ARHGAP8B1AHC4 643 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 C19orf81C9J6K1 198 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 CHADO15335 359 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 DNAJC6O75061 913 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 KRT37O76014 449 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 MXRA7P84157 204 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 ARHGAP8P85298 464 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 MBTD1Q05BQ5 628 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 SPDYAQ5MJ70 313 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 BSPRYQ5W0U4 402 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 PMF1Q6P1K2 205 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 HPDLQ96IR7 371 aa18.01■□□□□ 0.47
PTP4A3-201ENST00000329397 POLR2AP24928 1970 aaKnown RBP18■□□□□ 0.47
PTP4A3-201ENST00000329397 FAM163BP0C2L3 166 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 SURF1Q15526 300 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 CLEC4CQ8WTT0 213 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 DDX50Q9BQ39 737 aaKnown RBP18■□□□□ 0.47
PTP4A3-201ENST00000329397 PCDH18Q9HCL0 1135 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 APOL1O14791 398 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 ENDOD1O94919 500 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 TGDSO95455 350 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 SLC34A1Q06495 639 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 AMHR2Q16671 573 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 SPATA33Q96N06 139 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 FZD8Q9H461 694 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 GGA3Q9NZ52 723 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 PIM2Q9P1W9 311 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 PAK5Q9P286 719 aa18■□□□□ 0.47
PTP4A3-201ENST00000329397 APOEP02649 317 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 PFKMP08237 780 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 SLC10A2Q12908 348 aaPredicted RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 GRIK3Q13003 919 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 TFDP2Q14188 446 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 GOLGA7BQ2TAP0 167 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 WDR78Q5VTH9 848 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 ZNF534Q76KX8 674 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 POU5F2Q8N7G0 328 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 CXorf38Q8TB03 319 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 FAM136AQ96C01 138 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 TTC1Q99614 292 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 APOL6Q9BWW8 343 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 RNPEPQ9H4A4 650 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms