RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 MYO1FO00160 1098 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TBX3O15119 743 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 GOLGA6DP0CG33 693 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 BRAFP15056 766 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 KLRC1P26715 233 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SUMO2P61956 95 aaKnown RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CYP4F2P78329 520 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 MLC1Q15049 377 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CERKLQ49MI3 558 aaPredicted RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CAND1Q86VP6 1230 aaKnown RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 ANKRD13AQ8IZ07 590 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 ANKS1AQ92625 1134 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SPSB4Q96A44 273 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 RSPRY1Q96DX4 576 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SMURF2Q9HAU4 748 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 NRIP3Q9NQ35 241 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SAGE1Q9NXZ1 904 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 GOLGA6AQ9NYA3 693 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 AFF4Q9UHB7 1163 aaKnown RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TPCN1Q9ULQ1 816 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SNX14Q9Y5W7 946 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 LAMB1P07942 1786 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 UBR1Q8IWV7 1749 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 LOC102723971A0A1B0GUV8 181 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TRIM43BA6NCK2 446 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 USP1O94782 785 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CTGFP29279 349 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 EPHB2P29323 1055 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 PRKAR1BP31321 381 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CCNIQ14094 377 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 LRRC41Q15345 812 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CACHD1Q5VU97 1274 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SLC9A4Q6AI14 798 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 APOA5Q6Q788 366 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 KIRREL2Q6UWL6 708 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 RAB11FIP4Q86YS3 637 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CYP2W1Q8TAV3 490 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SMCR8Q8TEV9 937 aaPredicted RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TMEM171Q8WVE6 324 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 MAML1Q92585 1016 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 PPP2R3CQ969Q6 453 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TRIM43Q96BQ3 446 aaPredicted RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 LRRC27Q9C0I9 530 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 SACM1LQ9NTJ5 587 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TFCP2L1Q9NZI6 479 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 ZNF70Q9UC06 446 aaPredicted RBP1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 L1RE1Q9UN81 338 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 CDY1Q9Y6F8 540 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 ZNF804BA4D1E1 1349 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 TMEM8BA6NDV4 472 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 TMEM233B4DJY2 109 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 TISP43B9A030 160 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 UBE2Q2LH0YL09 131 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 CCP110O43303 1012 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 PRPF3O43395 683 aaKnown RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 TSPAN6O43657 245 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 MGEA5O60502 916 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 EXOC3O60645 756 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SRGAP2O75044 1071 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 RASSF9O75901 435 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 ERBB2P04626 1255 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 EPHA3P29320 983 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 ZNF81P51508 661 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 BCAT1P54687 386 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SUMO3P55854 103 aaPredicted RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 E2F1Q01094 437 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 POLD3Q15054 466 aaPredicted RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 L1TD1Q5T7N2 865 aaKnown RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 DENND2CQ68D51 928 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SWSAP1Q6NVH7 229 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SERPINA13PQ6UXR4 307 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SRGAP1Q7Z6B7 1085 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SIRT6Q8N6T7 355 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 TERB1Q8NA31 727 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 PNLDC1Q8NA58 520 aaKnown RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 LRTOMTQ8WZ04 291 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 NMD3Q96D46 503 aaKnown RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SNX18Q96RF0 628 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 C17orf80Q9BSJ5 609 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 XPNPEP3Q9NQH7 507 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 OGDHLQ9ULD0 1010 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 KMT2EQ8IZD2 1858 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SCN7AQ01118 1682 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 PRRT4C9JH25 899 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 PYCARD-AS1I3L0S3 204 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 M0R3H8 397 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 PPP6CO00743 305 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 RGS10O43665 173 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 SYNCRIPO60506 623 aaKnown RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 RASAL1O95294 804 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 LATS1O95835 1130 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 TUBB4AP04350 444 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 CHRM5P08912 532 aaPredicted RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 PRR35P0CG20 571 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 MYCLP12524 364 aaPredicted RBP1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 KELP23276 732 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 CYP1B1Q16678 543 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 MTX3Q5HYI7 312 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 LRCH2Q5VUJ6 765 aa1.95□□□□□ -2.1
CCDC144A-201ENST00000328495 DARS2Q6PI48 645 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms