RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PSMA2P25787 234 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ARL4AP40617 200 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SULT1E1P49888 294 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 NUBP1P53384 320 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TBX4P57082 545 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 DEUP1Q05D60 604 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SMAD2Q15796 467 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PRSS36Q5K4E3 855 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 C10orf120Q5SQS8 335 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ARMC3Q5W041 872 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 BSPRYQ5W0U4 402 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 OLFML1Q6UWY5 402 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 C4orf22Q6V702 233 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MMS22LQ6ZRQ5 1243 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PAQR9Q6ZVX9 377 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 LRRTM3Q86VH5 581 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ZSCAN30Q86W11 494 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 RHOT1Q8IXI2 618 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SPC24Q8NBT2 197 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 UCMAQ8WVF2 138 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 IRF7Q92985 503 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 C11orf70Q9BRQ4 267 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ADAMTS1Q9UHI8 967 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SLC8A2Q9UPR5 921 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ZKSCAN5Q9Y2L8 839 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 E5RJQ4 531 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MDM4O15151 490 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 NCAM2O15394 837 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CCL16O15467 120 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MTSS1O43312 755 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MBTPS2O43462 519 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TLR5O60602 858 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 OAS1P00973 400 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ASLP04424 464 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PDGFRAP16234 1089 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 HMGA1P17096 107 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CTNNA2P26232 953 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PBX3P40426 434 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MAPKAPK2P49137 400 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 KLK7P49862 253 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 VASPP50552 380 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 GALCP54803 685 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ADKP55263 362 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 SULT2A1Q06520 285 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF33AQ06730 810 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CAMK1Q14012 370 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CBX2Q14781 532 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PTPN20Q4JDL3 420 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 MPPE1Q53F39 396 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 FAM183BPQ6ZVS7 135 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TMC8Q8IU68 726 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 BBS5Q8N3I7 341 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 UBA3Q8TBC4 463 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 CSGALNACT1Q8TDX6 532 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 RNF34Q969K3 372 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 ZNF707Q96C28 371 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 NPY6RQ99463 290 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 NUP85Q9BW27 656 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 GMIPQ9P107 970 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 PPARGC1AQ9UBK2 798 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 HMGXB4Q9UGU5 601 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TPX2Q9ULW0 747 aaKnown RBP5.39□□□□□ -1.55
LRIT3-201ENST00000327908 VWA8A3KMH1 1905 aa5.39□□□□□ -1.55
LRIT3-201ENST00000327908 TMEM191CA6NGB0 347 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 RNF225M0QZC1 329 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 EPHB6O15197 1021 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 CHADO15335 359 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 SEC24AO95486 1093 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 ATF6P18850 670 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 HDCP19113 662 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 PTPN7P35236 360 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 NOP2P46087 812 aaKnown RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 NAP1L1P55209 391 aaKnown RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 PRKCQQ04759 706 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 HTR3DQ70Z44 454 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 TMCO2Q7Z6W1 182 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 ADHFE1Q8IWW8 467 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 ZMIZ2Q8NF64 920 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 PBKQ96KB5 322 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 S1PR5Q9H228 398 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 CXCL16Q9H2A7 254 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 IGFLR1Q9H665 355 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 TMLHEQ9NVH6 421 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 MARK1Q9P0L2 795 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 TJP2Q9UDY2 1190 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 RASAL2Q9UJF2 1139 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 NUP210Q8TEM1 1887 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 C2CD4BA6NLJ0 364 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 ZBTB24O43167 697 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 PAPSS1O43252 624 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-201ENST00000327908 ATP2C2O75185 946 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 TADA3O75528 432 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 CKMP06732 381 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 NCAM1P13591 858 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 MX2P20592 715 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 DNAJB1P25685 340 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 IRS1P35568 1242 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 GAD2Q05329 585 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 LRRC32Q14392 662 aa5.38□□□□□ -1.55
LRIT3-201ENST00000327908 SEL1L2Q5TEA6 688 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms