RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SLC25A52Q3SY17 297 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 PAPD7Q5XG87 772 aaKnown RBP15.95■□□□□ 0.14
PRPF3-201ENST00000324862 SCML4Q8N228 414 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 CCDC185Q8N715 623 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 NT5C3BQ969T7 300 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 PSMG2Q969U7 264 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 OSBPL9Q96SU4 736 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 ASNSD1Q9NWL6 643 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 ATG2AQ2TAZ0 1938 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 PI4K2BG5E9Z4 385 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 SART1O43290 800 aaKnown RBP15.94■□□□□ 0.14
PRPF3-201ENST00000324862 CSH1P0DML2 217 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 CSH2P0DML3 217 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 RARGP13631 454 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 CTNNA1P35221 906 aaKnown RBP15.94■□□□□ 0.14
PRPF3-201ENST00000324862 PTPN9P43378 593 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 ARCQ7LC44 396 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 GOLGA1Q92805 767 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 LRCH3Q96II8 777 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 SLITRK1Q96PX8 696 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 APOL5Q9BWW9 433 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 DDIT4Q9NX09 232 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 USP18Q9UMW8 372 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 C2orf78A6NCI8 922 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 LINC01565O15544 149 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 TRUB2O95900 331 aaKnown RBP15.94■□□□□ 0.14
PRPF3-201ENST00000324862 PYGMP11217 842 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 SLC1A1P43005 524 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 NTHL1P78549 312 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 GRIN2CQ14957 1233 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 VEPH1Q14D04 833 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 CA9Q16790 459 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 PPM1LQ5SGD2 360 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 RSRC2Q7L4I2 434 aaKnown RBP15.94■□□□□ 0.14
PRPF3-201ENST00000324862 MIB1Q86YT6 1006 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 CENPIQ92674 756 aaPredicted RBP15.94■□□□□ 0.14
PRPF3-201ENST00000324862 CORO1BQ9BR76 489 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 IL21Q9HBE4 155 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 ABCC13Q9NSE7 274 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRPF3-201ENST00000324862 SAR1BQ9Y6B6 198 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 GREB1Q4ZG55 1949 aa15.94■□□□□ 0.14
PRPF3-201ENST00000324862 MYO16Q9Y6X6 1858 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 DOCK6Q96HP0 2047 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 ZNF840PA6NDX5 716 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 RNF8O76064 485 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 CD48P09326 243 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 ZDHHC11BP0C7U3 371 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 MAN1A1P33908 653 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 GGCXP38435 758 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 CCR2P41597 374 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 EFEMP1Q12805 493 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 ZC3H12AQ5D1E8 599 aaKnown RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 ZFYVE27Q5T4F4 411 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 STXBP5Q5T5C0 1151 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 CCDC149Q6ZUS6 474 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 GAREM2Q75VX8 874 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 RAPGEF5Q92565 580 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 HSPH1Q92598 858 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 MYRFLQ96LU7 910 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 CYP2S1Q96SQ9 504 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 FAM204AQ9H8W3 233 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 PCDHA3Q9Y5H8 950 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 PRRC2BQ5JSZ5 2229 aaKnown RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 COL4A4P53420 1690 aaPredicted RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 ZNF638Q14966 1978 aaKnown RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 RARAP10276 462 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 CYP4F8P98187 520 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 DEUP1Q05D60 604 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 DUSP6Q16828 381 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 LRIT3Q3SXY7 679 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 BNIPLQ7Z465 357 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 TMC8Q8IU68 726 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 RNF25Q96BH1 459 aaPredicted RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 MRPL38Q96DV4 380 aaKnown RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 SLC22A12Q96S37 553 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 HERPUD2Q9BSE4 406 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 LRRC3Q9BY71 257 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 WDR6Q9NNW5 1121 aaKnown RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 TLR8Q9NR97 1041 aaKnown RBP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRPF3-201ENST00000324862 STAP1Q9ULZ2 295 aa15.93■□□□□ 0.14
PRPF3-201ENST00000324862 PDE2AO00408 941 aaPredicted RBP15.92■□□□□ 0.14
PRPF3-201ENST00000324862 TLR5O60602 858 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 ZMYND10O75800 440 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 GABRR2P28476 465 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 TCEAL5Q5H9L2 206 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 TMC5Q6UXY8 1006 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 ADAT2Q7Z6V5 191 aaKnown RBP15.92■□□□□ 0.14
PRPF3-201ENST00000324862 RHOT1Q8IXI2 618 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 PYROXD2Q8N2H3 581 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 LRRN4CLQ8ND94 238 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 RNF38Q9H0F5 515 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 A0A1W2PRU2 124 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 F11P03951 625 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 HMBSP08397 361 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 MYL4P12829 197 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 C10orf120Q5SQS8 335 aa15.92■□□□□ 0.14
PRPF3-201ENST00000324862 TXNDC8Q6A555 127 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms