RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SESN3P58005 492 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 SLC10A2Q12908 348 aaPredicted RBP18.07■□□□□ 0.48
COL9A1-201ENST00000320755 PDK2Q15119 407 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 PARP6Q2NL67 630 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 ANKRD20A2Q5SQ80 823 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 ANKRD20A1Q5TYW2 823 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 TTC39BQ5VTQ0 682 aaPredicted RBP18.07■□□□□ 0.48
COL9A1-201ENST00000320755 TRIM68Q6AZZ1 485 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 RFWD3Q6PCD5 774 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 UNC5BQ8IZJ1 945 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 PHACTR1Q9C0D0 580 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 PCMTD2Q9NV79 361 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 KLK14Q9P0G3 267 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 A6NJR5 290 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 ASB14A6NK59 587 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 SNRPAP09012 282 aaKnown RBP18.06■□□□□ 0.48
COL9A1-201ENST00000320755 AKAP5P24588 427 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 ETV4P43268 484 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 ERFP50548 548 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 TMPRSS15P98073 1019 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 FAM187BQ17R55 369 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 MDH1BQ5I0G3 518 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 PYROXD2Q8N2H3 581 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 EIF2AQ9BY44 585 aaKnown RBP18.06■□□□□ 0.48
COL9A1-201ENST00000320755 NFKBIZQ9BYH8 718 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 DENND2DQ9H6A0 471 aaPredicted RBP18.06■□□□□ 0.48
COL9A1-201ENST00000320755 NRDE2Q9H7Z3 1164 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 POPDC2Q9HBU9 364 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 SETD4Q9NVD3 440 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 PTPN4P29074 926 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 UNC5AQ6ZN44 842 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 RFX8Q6ZV50 586 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 VPS52Q8N1B4 723 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 INPP5DQ92835 1189 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 FAM167BQ9BTA0 163 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 ADARB2Q9NS39 739 aaKnown RBP18.06■□□□□ 0.48
COL9A1-201ENST00000320755 SLC17A6Q9P2U8 582 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 C2CD2Q9Y426 696 aa18.06■□□□□ 0.48
COL9A1-201ENST00000320755 SPDYE5A6NIY4 337 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 CSH1P0DML2 217 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 CSH2P0DML3 217 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 AMPD1P23109 780 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 KCNT2Q6UVM3 1135 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 MIPEPQ99797 713 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 MROH8Q9H579 483 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 KCNK13Q9HB14 408 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 SLC15A5A6NIM6 579 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 SLC18A2Q05940 514 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 TAPT1Q6NXT6 567 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 CATSPER4Q7RTX7 472 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 ALYREFQ86V81 257 aaKnown RBP18.05■□□□□ 0.48
COL9A1-201ENST00000320755 CDHR5Q9HBB8 845 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 PLAC1Q9HBJ0 212 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 KIAA1257Q9ULG3 409 aa18.05■□□□□ 0.48
COL9A1-201ENST00000320755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 PEX11AO75192 247 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 LMO2P25791 158 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 ADORA2AP29274 412 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 PRKD1Q15139 912 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 GRIK4Q16099 956 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 CTC1Q2NKJ3 1217 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 DENND5BQ6ZUT9 1274 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 SH2D5Q6ZV89 423 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 SLC35F5Q8WV83 523 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 FAM149B1Q96BN6 582 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 BRCA1P38398 1863 aaKnown RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 DESP17661 470 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 TGM2P21980 687 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 TAF11Q15544 211 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 SOWAHAQ2M3V2 549 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 ZNF618Q5T7W0 954 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 ZCCHC23Q6ZST2 131 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 FAM131BQ86XD5 332 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 NDUFAF2Q8N183 169 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 CCDC185Q8N715 623 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 C16orf70Q9BSU1 422 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 RNPEPL1Q9HAU8 725 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 TMPRSS4Q9NRS4 437 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 GYG2O15488 501 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 APOEP02649 317 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 DLDP09622 509 aaKnown RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 CHI3L2Q15782 390 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 APBB1IPQ7Z5R6 666 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 ARID3BQ8IVW6 561 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 CDCA5Q96FF9 252 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 LGMNQ99538 433 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 CADM1Q9BY67 442 aaKnown RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 TRIM6Q9C030 488 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-201ENST00000320755 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 AP4E1Q9UPM8 1137 aa18.04■□□□□ 0.48
COL9A1-201ENST00000320755 CITO14578 2027 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 I3L4J1 428 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 SPAG6O75602 509 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 DHRS4L1P0CG22 281 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 TSHRP16473 764 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 L1CAMP32004 1257 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 BST1Q10588 318 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 SLC9A4Q6AI14 798 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 DSTYKQ6XUX3 929 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 OSMRQ99650 979 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms