RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 CPA4Q9UI42 421 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 TTLL3Q9Y4R7 772 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 METTL18O95568 372 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 TSHRP16473 764 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 YWHAGP61981 247 aaKnown RBP eCLIP21.41■■□□□ 1.02
TTC39C-202ENST00000317571 SH2D5Q6ZV89 423 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 LIMS2Q7Z4I7 341 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 TLK2Q86UE8 772 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 PYROXD2Q8N2H3 581 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 SLC44A1Q8WWI5 657 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 CYTH2Q99418 400 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 PARK7Q99497 189 aaKnown RBP21.41■■□□□ 1.02
TTC39C-202ENST00000317571 DHX35Q9H5Z1 703 aaKnown RBP21.41■■□□□ 1.02
TTC39C-202ENST00000317571 POPDC2Q9HBU9 364 aa21.41■■□□□ 1.02
TTC39C-202ENST00000317571 ZNF865P0CJ78 1059 aaPredicted RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 RDXP35241 583 aaKnown RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 GNL1P36915 607 aaPredicted RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 BCAT1P54687 386 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 PITX1P78337 314 aaPredicted RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 FAAP100Q0VG06 881 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 XKR4Q5GH76 650 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 ZDHHC17Q8IUH5 632 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 GRAMD1AQ96CP6 724 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 CFAP36Q96G28 342 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 KLHL14Q9P2G3 628 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 AP4E1Q9UPM8 1137 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 SLC15A5A6NIM6 579 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 UNCXA6NJT0 531 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 CXorf49A8MYA2 514 aaPredicted RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 BEX3Q00994 111 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 CBLBQ13191 982 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 CCL14Q16627 93 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 HHATQ5VTY9 493 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 OTUD1Q5VV17 481 aaPredicted RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 OTOAQ7RTW8 1153 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 VSIG1Q86XK7 387 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 KIF2BQ8N4N8 673 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 SMG8Q8ND04 991 aaKnown RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 ZNF75CPQ92670 426 aaPredicted RBP21.4■■□□□ 1.02
TTC39C-202ENST00000317571 SMYD2Q9NRG4 433 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 GDAP2Q9NXN4 497 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 USP3Q9Y6I4 520 aa21.4■■□□□ 1.02
TTC39C-202ENST00000317571 WDR91A4D1P6 747 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 IQCA1LA6NCM1 817 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 MAGEA6P43360 314 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 PTK7Q13308 1070 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 MORN1Q5T089 497 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 PNMA8AQ86V59 439 aaPredicted RBP21.39■■□□□ 1.02
TTC39C-202ENST00000317571 NETO2Q8NC67 525 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 LRRC8CQ8TDW0 803 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 PTPRN2Q92932 1015 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 CYLDQ9NQC7 956 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 TMPRSS4Q9NRS4 437 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 CACNG4Q9UBN1 327 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 CHKBQ9Y259 395 aa21.39■■□□□ 1.02
TTC39C-202ENST00000317571 HAS3O00219 553 aa21.39■■□□□ 1.01
TTC39C-202ENST00000317571 ZWINTO95229 277 aa21.39■■□□□ 1.01
TTC39C-202ENST00000317571 APRTP07741 180 aa21.39■■□□□ 1.01
TTC39C-202ENST00000317571 APBB1IPQ7Z5R6 666 aaPredicted RBP21.39■■□□□ 1.01
TTC39C-202ENST00000317571 CSPG4P5Q96PW8 444 aa21.39■■□□□ 1.01
TTC39C-202ENST00000317571 MYLK2Q9H1R3 596 aa21.39■■□□□ 1.01
TTC39C-202ENST00000317571 BEST1O76090 585 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 KCNE1P15382 129 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 PSEN2P49810 448 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 C10orf82Q8WW14 230 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 NCAPGQ9BPX3 1015 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 IPPQ9Y573 584 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 NUMBLQ9Y6R0 609 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 CFAP69A5D8W1 941 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 IGF2BP3O00425 579 aaKnown RBP eCLIP21.38■■□□□ 1.01
TTC39C-202ENST00000317571 GRIA1P42261 906 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 NCBP2-AS2Q69YL0 99 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 ASRGL1Q7L266 308 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 MPP5Q8N3R9 675 aa21.38■■□□□ 1.01
TTC39C-202ENST00000317571 ALG13Q9NP73 1137 aaKnown RBP21.38■■□□□ 1.01
TTC39C-202ENST00000317571 MEIS3P2A8K0S8 358 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 ZNF487B1APH4 448 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 CLDN5O00501 218 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 UGT1A9O60656 530 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 NQO1P15559 274 aaKnown RBP21.37■■□□□ 1.01
TTC39C-202ENST00000317571 GOT1P17174 413 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 AMPD1P23109 780 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 PREPLQ4J6C6 727 aaPredicted RBP21.37■■□□□ 1.01
TTC39C-202ENST00000317571 PLEKHG4Q58EX7 1191 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 KCNT2Q6UVM3 1135 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 FAM131BQ86XD5 332 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 UGT1A7Q9HAW7 530 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 UGT1A10Q9HAW8 530 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 UGT1A8Q9HAW9 530 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 PNPLA8Q9NP80 782 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 DTLQ9NZJ0 730 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 GTF2IRD1Q9UHL9 959 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 CD4P01730 458 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 VAV1P15498 845 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 ACAT1P24752 427 aaKnown RBP21.37■■□□□ 1.01
TTC39C-202ENST00000317571 ETV4P43268 484 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 MAGEA3P43357 314 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 TAF6P49848 677 aa21.37■■□□□ 1.01
TTC39C-202ENST00000317571 NEK3P51956 506 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms