RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 HMOX2P30519 316 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ATP5OP48047 213 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 BCAR1P56945 870 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MAPRE2Q15555 327 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 LRRC36Q1X8D7 754 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 DHRS4L2Q6PKH6 230 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RAPH1Q70E73 1250 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 FAM71DQ8N9W8 422 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 KCTD6Q8NC69 237 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TNIP2Q8NFZ5 429 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TSPAN14Q8NG11 270 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 AGBL1Q96MI9 1066 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 EBNA1BP2Q99848 306 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ADAM33Q9BZ11 813 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 FAM124BQ9H5Z6 455 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 EFCAB1Q9HAE3 211 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 C8orf4Q9NR00 106 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TUBA8Q9NY65 449 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MARCOQ9UEW3 520 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MYH10P35580 1976 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ECM29Q5VYK3 1845 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SETD1BQ9UPS6 1966 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PIGRP01833 764 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RPL7AP62424 266 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TXNL4AP83876 142 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CBX3Q13185 183 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PDAP1Q13442 181 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 APOFQ13790 326 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 AEBP2Q6ZN18 517 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RFX8Q6ZV50 586 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC80Q76M96 950 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PACRGLQ8N7B6 248 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CEP170P1Q96L14 293 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 LHX5Q9H2C1 402 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 AGO2Q9UKV8 859 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MYRFQ9Y2G1 1151 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 INPP5FQ9Y2H2 1132 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF142P52746 1687 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TCRBV5S1A1TA0A578 114 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 DHX15O43143 795 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ASS1P00966 412 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ETS1P14921 441 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 KCNJ11Q14654 390 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MSS51Q4VC12 460 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CDHR3Q6ZTQ4 885 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 LDHDQ86WU2 507 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SMYD1Q8NB12 490 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ZFP28Q8NHY6 868 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PDCD6IPQ8WUM4 868 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RBM38Q9H0Z9 239 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RAB6BQ9NRW1 208 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CCNL1Q9UK58 526 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 FEM1BQ9UK73 627 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 BCS1LQ9Y276 419 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MYH7BA7E2Y1 1941 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 NOL3O60936 208 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TPSB2P20231 275 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TGM2P21980 687 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 YWHAZP63104 245 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CNTN2Q02246 1040 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ZBTB17Q13105 803 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 GRM1Q13255 1194 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 MSLNQ13421 630 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TPSAB1Q15661 275 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC153Q494R4 210 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TEX44Q53QW1 395 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 LPCAT4Q643R3 524 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PRR5LQ6MZQ0 368 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 KLHL35Q6PF15 583 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 KLHDC10Q6PID8 442 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SLC7A3Q8WY07 619 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 BORCS5Q969J3 196 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CLPTM1LQ96KA5 538 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TSNARE1Q96NA8 513 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ARHGAP28Q9P2N2 729 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ADAM28Q9UKQ2 775 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TMED5Q9Y3A6 229 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 FAM159BA6NKW6 160 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF487B1APH4 448 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ITM2AO43736 263 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HSPA4LO95757 839 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 C8BP07358 591 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CD19P15391 556 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PORP16435 677 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HARS2P49590 506 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 NFIAQ12857 509 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 KLF10Q13118 480 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TTLL12Q14166 644 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 KCTD21Q4G0X4 260 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PDPK2PQ6A1A2 396 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SLC25A41Q8N5S1 370 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 DDHD1Q8NEL9 900 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 EME1Q96AY2 570 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 LBHD1Q9BQE6 289 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 GRIP2Q9C0E4 1043 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 FER1L4A9Z1Z3 1794 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 DCAF8L1A6NGE4 600 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 LRCH4O75427 683 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 GH2P01242 217 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms