RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RAB41Q5JT25 222 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 LHX8Q68G74 356 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 BHLHA9Q7RTU4 235 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 RNF180Q86T96 592 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 FAM131BQ86XD5 332 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CCDC13Q8IYE1 715 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 ZBED8Q8IZ13 594 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CCDC33Q8N5R6 958 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 MYCBPAPQ8TBZ2 947 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 HASPINQ8TF76 798 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 FAM149B1Q96BN6 582 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 RTP4Q96DX8 246 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CSPG4P5Q96PW8 444 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 SLC2A13Q96QE2 648 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 NPY6RQ99463 290 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 PKMYT1Q99640 499 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 NCAPGQ9BPX3 1015 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 PPANQ9NQ55 473 aaKnown RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 ETNK2Q9NVF9 386 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 ZMYND8Q9ULU4 1186 aaPredicted RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 FZD10Q9ULW2 581 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 NAALADL1Q9UQQ1 740 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CLUHO75153 1309 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 H7C0C1 242 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 I6L893 689 aaPredicted RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 DAB1O75553 588 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 B3GAT3O94766 335 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 FAM200BP0CF97 657 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CKBP12277 381 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 GOT1P17174 413 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 RBL1P28749 1068 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 ATP5OP48047 213 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 SULT1E1P49888 294 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 HIF1AQ16665 826 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 DEFB115Q30KQ5 88 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 SYCP2LQ5T4T6 812 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 FAM171BQ6P995 826 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 PCGF5Q86SE9 256 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 NLRP14Q86W24 1093 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 ECHDC2Q86YB7 292 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 ATXN2LQ8WWM7 1075 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 CCT8L2Q96SF2 557 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 ULBP1Q9BZM6 244 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 DNAI2Q9GZS0 605 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CNOT10Q9H9A5 744 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 ANLNQ9NQW6 1124 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 TMLHEQ9NVH6 421 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 RSPH14Q9UHP6 348 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 LGALS13Q9UHV8 139 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 XPO7Q9UIA9 1087 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 CDH9Q9ULB4 789 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 INPP5FQ9Y2H2 1132 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 BCLAF3A2AJT9 711 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 SRRM3A6NNA2 597 aaPredicted RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 E7ESA3 106 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 M0QZQ0 153 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 KCNN4O15554 427 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 AP1G2O75843 785 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CYP11A1P05108 521 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 AMPD1P23109 780 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 NOS2P35228 1153 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 SLC8A3P57103 927 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 MPP2Q14168 576 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 KCNJ11Q14654 390 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 STAT4Q14765 748 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 VSTM1Q6UX27 236 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CENPUQ71F23 418 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 LRRTM3Q86VH5 581 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 IGDCC3Q8IVU1 814 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 AGGF1Q8N302 714 aaeCLIP6.8□□□□□ -1.32
USP47-201ENST00000305481 MAML1Q92585 1016 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 ARHGEF2Q92974 986 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 CENPTQ96BT3 561 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 TMEM209Q96SK2 561 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CFHR5Q9BXR6 569 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 LRRC4Q9HBW1 653 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CSNK1G1Q9HCP0 422 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CREBZFQ9NS37 354 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 PIGVQ9NUD9 493 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 TBK1Q9UHD2 729 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 NOD1Q9Y239 953 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 GMNCA6NCL1 334 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 E7EVH7 732 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 NDUFAB1O14561 156 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CABYRO75952 493 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 USP17L7P0C7H9 530 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 DAOAP59103 153 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 BASP1P80723 227 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 GRIK3Q13003 919 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 NCBP2-AS2Q69YL0 99 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 SIX6OS1Q8N1H7 587 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 OR10T2Q8NGX3 314 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 LINC01599Q8WXQ3 324 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 RSPH1Q8WYR4 309 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 MYLPFQ96A32 169 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 XPO6Q96QU8 1125 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms