RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 KBTBD2Q8IY47 623 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 ZMYM5Q9UJ78 669 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 TMCC3Q9ULS5 477 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 ZSCAN5CA6NGD5 496 aaPredicted RBP16.58■□□□□ 0.24
SSRP1-202ENST00000293880 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.58■□□□□ 0.24
SSRP1-202ENST00000293880 TBC1D12O60347 775 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 PLA2G6O60733 806 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 ALDH1A3P47895 512 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 TFDP3Q5H9I0 405 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 GOLGA8TH3BQL2 631 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 KCNJ6P48051 423 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 KBTBD12Q3ZCT8 623 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 TBC1D16Q8TBP0 767 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 A8MX80 341 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 GLI1P08151 1106 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 CELF6Q96J87 481 aaKnown RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ANKZF1Q9H8Y5 726 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 PPCSQ9HAB8 311 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 FANCEQ9HB96 536 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 NT5MQ9NPB1 228 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 SLC9A8Q9Y2E8 581 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 TK2O00142 265 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 FAM58BPP0C7Q3 252 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 RFC5P40937 340 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ITGADQ13349 1161 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 PDZK1Q5T2W1 519 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 SPOCD1Q6ZMY3 1216 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 MAN1C1Q9NR34 630 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 BTBD7Q9P203 1132 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 TRPC4Q9UBN4 977 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 NR3C2P08235 984 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 CCNG1P51959 295 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF177Q13360 481 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 PGBD2Q6P3X8 592 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 CLVS1Q8IUQ0 354 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 MYO1HQ8N1T3 1032 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 TSEN34Q9BSV6 310 aaKnown RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ISCA1Q9BUE6 129 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 COPS7BQ9H9Q2 264 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 AVENQ9NQS1 362 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ANXA9O76027 345 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 STARD3Q14849 445 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 ZBTB46Q86UZ6 589 aa16.57■□□□□ 0.24
SSRP1-202ENST00000293880 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSRP1-202ENST00000293880 SDR42E2A6NKP2 422 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 FAM153BP0C7A2 387 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 C4BPBP20851 252 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 SRP54P61011 504 aaKnown RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 FAM153CQ494X1 144 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 GATAD2AQ86YP4 633 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 LRRC49Q8IUZ0 686 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 KIFC1Q9BW19 673 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CTNNAL1Q9UBT7 734 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CRB1P82279 1406 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 F8VZ95 297 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 MSH4O15457 936 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 C21orf59P57076 290 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 DDR2Q16832 855 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 TRIQKQ629K1 86 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 NEK10Q6ZWH5 1172 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 WDR36Q8NI36 951 aaKnown RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 SEPT1Q8WYJ6 367 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 TEX13BQ9BXU2 312 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 SEMA6BQ9H3T3 888 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 WHRNQ9P202 907 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 MGAT4DA6NG13 374 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 RRN3P2A6NIE6 340 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 NUP107P57740 925 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CAMK2GQ13555 558 aaPredicted RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 N4BP2L1Q5TBK1 243 aaPredicted RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 PCNX4Q63HM2 1172 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CYP4Z1Q86W10 505 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 DGCR6LQ9BY27 220 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 PTGES3LE9PB15 166 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 ADRA2BP18089 450 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 RASA1P20936 1047 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 IER5Q5VY09 327 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 EFL1Q7Z2Z2 1120 aaKnown RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CACTIN-AS1Q8N1I8 211 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 ATP6V0D2Q8N8Y2 350 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 RXFP1Q9HBX9 757 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 GPAMQ9HCL2 828 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 USP18Q9UMW8 372 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 KBTBD13C9JR72 458 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 BTN3A3O00478 584 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 MBL2P11226 248 aaPredicted RBP16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CYP11B1P15538 503 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 GRIK3Q13003 919 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 POU6F1Q14863 301 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 CLEC17AQ6ZS10 378 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 NUDT18Q6ZVK8 323 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms