RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RYBPQ8N488 228 aaPredicted RBP16.46■□□□□ 0.23
SMAD6-201ENST00000288840 OPTNQ96CV9 577 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 MTO1Q9Y2Z2 717 aaKnown RBP16.46■□□□□ 0.23
SMAD6-201ENST00000288840 ATP8B3O60423 1300 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 CLUHO75153 1309 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 TCN1P20061 433 aaPredicted RBP16.46■□□□□ 0.23
SMAD6-201ENST00000288840 AVPR1AP37288 418 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 GARSP41250 739 aaKnown RBP16.46■□□□□ 0.23
SMAD6-201ENST00000288840 RFWD3Q6PCD5 774 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 TEX9Q8N6V9 391 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 PTPRN2Q92932 1015 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 NKD2Q969F2 451 aaPredicted RBP16.46■□□□□ 0.23
SMAD6-201ENST00000288840 MTBPQ96DY7 904 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 CACNG4Q9UBN1 327 aa16.46■□□□□ 0.23
SMAD6-201ENST00000288840 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 ERVK-10P10266 1014 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 CYP2C9P11712 490 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 MGAT5Q09328 741 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 ASPHQ12797 758 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 RABGAP1LQ5R372 815 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 MAP1SQ66K74 1059 aaPredicted RBP16.45■□□□□ 0.22
SMAD6-201ENST00000288840 C15orf39Q6ZRI6 1047 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 CLNKQ7Z7G1 428 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 COLGALT1Q8NBJ5 622 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 EDEM1Q92611 657 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 ETNK2Q9NVF9 386 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 GPRC5DQ9NZD1 345 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 NKX1-2Q9UD57 310 aaPredicted RBP16.45■□□□□ 0.22
SMAD6-201ENST00000288840 CLDN5O00501 218 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 LGALS2P05162 132 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 ABHD2P08910 425 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 ZNF143P52747 638 aaPredicted RBP16.45■□□□□ 0.22
SMAD6-201ENST00000288840 APPL2Q8NEU8 664 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 HASPINQ8TF76 798 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 APOPT1Q96IL0 206 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 NMUR2Q9GZQ4 415 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 PDE5AO76074 875 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 GOT1P17174 413 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 DEUP1Q05D60 604 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 OASLQ15646 514 aaKnown RBP16.45■□□□□ 0.22
SMAD6-201ENST00000288840 SLCO2A1Q92959 643 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 CELF6Q96J87 481 aaKnown RBP16.45■□□□□ 0.22
SMAD6-201ENST00000288840 TXNRD2Q9NNW7 524 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 LGALS13Q9UHV8 139 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 SCOCQ9UIL1 159 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 MCM8Q9UJA3 840 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 NOD1Q9Y239 953 aa16.45■□□□□ 0.22
SMAD6-201ENST00000288840 CXorf49A8MYA2 514 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 DFFAO00273 331 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 PPEF2O14830 753 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 AIM2O14862 343 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 USP2O75604 605 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 ADIGQ0VDE8 80 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 EFHC2Q5JST6 749 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 RNF148Q8N7C7 305 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 TFB1MQ8WVM0 346 aaKnown RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 OXNAD1Q96HP4 312 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 NIFKQ9BYG3 293 aaKnown RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 DENND2DQ9H6A0 471 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 BFARQ9NZS9 450 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 EME2A4GXA9 379 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 ASB14A6NK59 587 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 CALRP27797 417 aaKnown RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 SOX11P35716 441 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 N4BP2L1Q5TBK1 243 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 SLC35B2Q8TB61 432 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 RNPEPL1Q9HAU8 725 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 MAN1C1Q9NR34 630 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 ZMYND8Q9ULU4 1186 aaPredicted RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 ACTL7BQ9Y614 415 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 E9PBE3 544 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 KLHL41O60662 606 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 NCAM1P13591 858 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 GMPRP36959 345 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 PTDSS1P48651 473 aaKnown RBP16.44■□□□□ 0.22
SMAD6-201ENST00000288840 PTP4A2Q12974 167 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 ITGA9Q13797 1035 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 SNX30Q5VWJ9 437 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 ANKRD13AQ8IZ07 590 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 DEFB106AQ8N104 65 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 PLD5Q8N7P1 536 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 STK32AQ8WU08 396 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 TUBGCP4Q9UGJ1 667 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 SCN9AQ15858 1988 aa16.44■□□□□ 0.22
SMAD6-201ENST00000288840 STBD1O95210 358 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 CALB2P22676 271 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 ARPP19P56211 112 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 MAP3K7CLP57077 242 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 UBAP2LQ14157 1087 aaKnown RBP16.43■□□□□ 0.22
SMAD6-201ENST00000288840 SLC10A6Q3KNW5 377 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 FASTKD1Q53R41 847 aaKnown RBP16.43■□□□□ 0.22
SMAD6-201ENST00000288840 DPEP3Q9H4B8 488 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 TMPRSS4Q9NRS4 437 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 SLC39A10Q9ULF5 831 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 GRID1Q9ULK0 1009 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms