RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 QRFPRQ96P65 431 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 RIT2Q99578 217 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 APOL5Q9BWW9 433 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 RAB6BQ9NRW1 208 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 JCADQ9P266 1359 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 IST1P53990 364 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 PSME2Q9UL46 239 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ADCY6O43306 1168 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 CNOT3O75175 753 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 NCAM1P13591 858 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 RPS2P15880 293 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 GRK4P32298 578 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 PIK3CGP48736 1102 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 DGUOKQ16854 277 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ANAPC2Q9UJX6 822 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 BTBD3Q9Y2F9 522 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 CBY1Q9Y3M2 126 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 PDE2AO00408 941 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 AGTP01019 485 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 WARSP23381 471 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 RRM1P23921 792 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 LHX1P48742 406 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 PPP1R16AQ96I34 528 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 WDR12Q9GZL7 423 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 RACGAP1Q9H0H5 632 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ABCA8O94911 1581 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 PDS5AQ29RF7 1337 aaKnown RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 HOXB8P17481 243 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ZNF135P52742 658 aaPredicted RBP13.63□□□□□ -0.23
PRDM16-201ENST00000270722 CDC73Q6P1J9 531 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 SPATA18Q8TC71 538 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 NUP50Q9UKX7 468 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 EPN2O95208 641 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 NFYCQ13952 458 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 LRRC20Q8TCA0 184 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 TELO2Q9Y4R8 837 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 USP6P35125 1406 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 MSCO60682 206 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 STAT5AP42229 794 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 FAM180AQ6UWF9 173 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 AGBL3Q8NEM8 1001 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 PIGBQ92521 554 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 CYP4F11Q9HBI6 524 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 NINQ8N4C6 2090 aa13.63□□□□□ -0.23
PRDM16-201ENST00000270722 METTL21EPA6NDL7 271 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 SARSP49591 514 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 ALDH6A1Q02252 535 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 MTA2O94776 668 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CKBP12277 381 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CDC16Q13042 620 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 UBE2E3Q969T4 207 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 ELP3Q9H9T3 547 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 PDGFCQ9NRA1 345 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 ANKRD6Q9Y2G4 727 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 COQ6Q9Y2Z9 468 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 SLCO1B7G3V0H7 640 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CHP2O43745 196 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 HHIPL2Q6UWX4 724 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 DCP1AQ9NPI6 582 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 ITIH4Q14624 930 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CCDC33Q8N5R6 958 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 PHC3Q8NDX5 983 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 KCTD4Q8WVF5 259 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 ZNF112Q9UJU3 913 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 RPS7P62081 194 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CENPTQ96BT3 561 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 REXO4Q9GZR2 422 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 MSRAQ9UJ68 235 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 EIF4E1BA6NMX2 242 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 RAG1P15918 1043 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 NOS3P29474 1203 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 MAGOHP61326 146 aaKnown RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 CACNB2Q08289 660 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 PRKG2Q13237 762 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 TYSND1Q2T9J0 566 aa13.62□□□□□ -0.23
PRDM16-201ENST00000270722 TTC39BQ5VTQ0 682 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 ZNF746Q6NUN9 644 aaPredicted RBP13.62□□□□□ -0.23
PRDM16-201ENST00000270722 PMF1Q6P1K2 205 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms