RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 F7P08709 466 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CSH1P0DML2 217 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CSH2P0DML3 217 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 ALADP13716 330 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 ALDH3A1P30838 453 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CCDC15Q0P6D6 951 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 ZNF792Q3KQV3 632 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 FAM47CQ5HY64 1035 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 MROH9Q5TGP6 573 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CES4AQ5XG92 561 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CLNKQ7Z7G1 428 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 TMEM40Q8WWA1 233 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 SRPK1Q96SB4 655 aaKnown RBP11.28□□□□□ -0.6
TCTN3-201ENST00000265993 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 TXLNGQ9NUQ3 528 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 HEY2Q9UBP5 337 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 MARCOQ9UEW3 520 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-201ENST00000265993 SHROOM3Q8TF72 1996 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 SLC15A5A6NIM6 579 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 CHADO15335 359 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 RECQL4O94761 1208 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 AMPD1P23109 780 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 SERPINB3P29508 390 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 GMPRP36959 345 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 BOLA3Q53S33 107 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 ZNF534Q76KX8 674 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
TCTN3-201ENST00000265993 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-201ENST00000265993 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 GPRC5AQ8NFJ5 357 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 MAGEC3Q8TD91 643 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 LGMNQ99538 433 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 KATNBL1Q9H079 304 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 PAK5Q9P286 719 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 ARMCX1Q9P291 453 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 HESX1Q9UBX0 185 aa11.28□□□□□ -0.6
TCTN3-201ENST00000265993 IQANK1A0A1B0GTG1 560 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 FAM237BA0A1B0GVD1 139 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 TM9SF1O15321 606 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 ENTPD5O75356 428 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 DCTN3O75935 186 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 KITP10721 976 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 GOT1P17174 413 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 L1CAMP32004 1257 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 ERFP50548 548 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 NEK3P51956 506 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 OLIG2Q13516 323 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 HIC1Q14526 733 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 CTC1Q2NKJ3 1217 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 FYB2Q5VWT5 728 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 UNC5AQ6ZN44 842 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 TMEM110Q86TL2 294 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 FAM13CQ8NE31 585 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 GIMAP7Q8NHV1 300 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 APOPT1Q96IL0 206 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 MIPEPQ99797 713 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 NCAPGQ9BPX3 1015 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 LRMDAQ9H2I8 198 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 MTMR10Q9NXD2 777 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 FETUBQ9UGM5 382 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 PDHXO00330 501 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 CLDN5O00501 218 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 C2CD2LO14523 706 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 GRM5P41594 1212 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 MRPS5P82675 430 aaKnown RBP11.27□□□□□ -0.61
TCTN3-201ENST00000265993 POU5F1BQ06416 359 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 RFWD3Q6PCD5 774 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 ZCCHC23Q6ZST2 131 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 DPP9Q86TI2 863 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 LONP2Q86WA8 852 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 TTC8Q8TAM2 541 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 FAM149B1Q96BN6 582 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
TCTN3-201ENST00000265993 KLC2Q9H0B6 622 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 PPCSQ9HAB8 311 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 KCNK13Q9HB14 408 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 PCMTD2Q9NV79 361 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 ARL8BQ9NVJ2 186 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 AP4E1Q9UPM8 1137 aa11.27□□□□□ -0.61
TCTN3-201ENST00000265993 TTC3P53804 2025 aa11.26□□□□□ -0.61
TCTN3-201ENST00000265993 HMX2A2RU54 273 aa11.26□□□□□ -0.61
TCTN3-201ENST00000265993 COPEO14579 308 aa11.26□□□□□ -0.61
TCTN3-201ENST00000265993 NDC80O14777 642 aa11.26□□□□□ -0.61
TCTN3-201ENST00000265993 MMP3P08254 477 aa11.26□□□□□ -0.61
TCTN3-201ENST00000265993 TROVE2P10155 538 aaKnown RBP eCLIP11.26□□□□□ -0.61
TCTN3-201ENST00000265993 ACAT1P24752 427 aaKnown RBP11.26□□□□□ -0.61
TCTN3-201ENST00000265993 YY1P25490 414 aa11.26□□□□□ -0.61
TCTN3-201ENST00000265993 TKTP29401 623 aaKnown RBP11.26□□□□□ -0.61
TCTN3-201ENST00000265993 SKIV2L2P42285 1042 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms