RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 VEPH1Q14D04 833 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 OTOP2Q7RTS6 562 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CRTAC1Q9NQ79 661 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CNGB3Q9NQW8 809 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CWC15Q9P013 229 aaKnown RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 YJEFN3A6XGL0 299 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 E7ENQ6 273 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 F8W810 466 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 H7C4K7 107 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 APOC4-APOC2K7ER74 178 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 ENPP3O14638 875 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 NRP1O14786 923 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 BEST1O76090 585 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 APOC2P02655 101 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 ITGB1P05556 798 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 GNGT1P63211 74 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 GABPB1Q06547 395 aaPredicted RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 SMAD1Q15797 465 aaKnown RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 DUPD1Q68J44 220 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 ZNF572Q7Z3I7 529 aaPredicted RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 CCDC117Q8IWD4 279 aaPredicted RBP9.68□□□□□ -0.86
SSR3-201ENST00000265044 CCDC13Q8IYE1 715 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 STKLD1Q8NE28 680 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 CFAP36Q96G28 342 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 RNF157Q96PX1 679 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 TKTL2Q9H0I9 626 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 RGS18Q9NS28 235 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 NKIRAS1Q9NYS0 192 aa9.68□□□□□ -0.86
SSR3-201ENST00000265044 H3BQF6 201 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 PPP1R12AO14974 1030 aaPredicted RBP9.67□□□□□ -0.86
SSR3-201ENST00000265044 LIASO43766 372 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CPP00450 1065 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 NR1D1P20393 614 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 TMED2Q15363 201 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
SSR3-201ENST00000265044 FAM182AQ5T1J6 154 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 LHX8Q68G74 356 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 OLFML1Q6UWY5 402 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SCAMP5Q8TAC9 235 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 USP33Q8TEY7 942 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CAVIN3Q969G5 261 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CAPS2Q9BXY5 557 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CEP41Q9BYV8 373 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CYP4F11Q9HBI6 524 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 XPO7Q9UIA9 1087 aaKnown RBP9.67□□□□□ -0.86
SSR3-201ENST00000265044 C9IYK1 514 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 DDHD2O94830 711 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 GOT1P17174 413 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SERPINB6P35237 376 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 MAGOHP61326 146 aaKnown RBP9.67□□□□□ -0.86
SSR3-201ENST00000265044 CAP1Q01518 475 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 TCEAL1Q15170 157 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SLC25A52Q3SY17 297 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 BBS12Q6ZW61 710 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CPLX4Q7Z7G2 160 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 NPAS4Q8IUM7 802 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 PWWP2AQ96N64 755 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SAMD15Q9P1V8 674 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 TMEM59LQ9UK28 342 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 MAP2K7O14733 419 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 ACRP10323 421 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 ALDH1A3P47895 512 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 DUSP4Q13115 394 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 LONRF1Q17RB8 773 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CCDC38Q502W7 563 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 ANKRD20A8PQ5CZ79 823 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SYPL2Q5VXT5 272 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 FUT10Q6P4F1 479 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 DENND5BQ6ZUT9 1274 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 ARL8AQ96BM9 186 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 TMEM209Q96SK2 561 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 NEUROG2Q9H2A3 272 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 PABPC3Q9H361 631 aaKnown RBP9.67□□□□□ -0.86
SSR3-201ENST00000265044 PCDH18Q9HCL0 1135 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 WHRNQ9P202 907 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SFMBT1Q9UHJ3 866 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 CDY1Q9Y6F8 540 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 SQORQ9Y6N5 450 aa9.67□□□□□ -0.86
SSR3-201ENST00000265044 AMHP03971 560 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 URODP06132 367 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 YWHAQP27348 245 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RBL1P28749 1068 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 OR1D2P34982 312 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 MAGEA4P43358 317 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 IFNAR2P48551 515 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 ADCY2Q08462 1091 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 MAP3K21Q5TCX8 1036 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 HFE2Q6ZVN8 426 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 TMC3Q7Z5M5 1100 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 NECAB2Q7Z6G3 386 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PYROXD2Q8N2H3 581 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CCDC110Q8TBZ0 833 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 APBB2Q92870 758 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 SUSD3Q96L08 255 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 FBXO44Q9H4M3 255 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 TRPC7Q9HCX4 862 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 SOAT2O75908 522 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 VIMP08670 466 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms