RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CYP4Z2PQ8N1L4 340 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 SLC20A1Q8WUM9 679 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 VPS33AQ96AX1 596 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 ARMC7Q9H6L4 198 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 ELP3Q9H9T3 547 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 PLA2G6O60733 806 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 TSC22D2O75157 780 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 PGS1Q32NB8 556 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 USP31Q70CQ4 1352 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 OGTO15294 1046 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 FBXO21O94952 628 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 ITGAXP20702 1163 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 CCT8P50990 548 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 PPP1R10Q96QC0 940 aaKnown RBP17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 LNPEPQ9UIQ6 1025 aa17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 CHD2O14647 1828 aaKnown RBP17.96■□□□□ 0.47
NOTCH3-201ENST00000263388 ZCCHC18P0CG32 403 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 GPC1P35052 558 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 ZNF438Q7Z4V0 828 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 SLC26A11Q86WA9 606 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 REXO1L1PQ8IX06 675 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 C10orf53Q8N6V4 93 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 SYNDIG1Q9H7V2 258 aa17.96■□□□□ 0.46
NOTCH3-201ENST00000263388 GNG14A0A1W2PPG7 69 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 KPNA1P52294 538 aaPredicted RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 PTENP60484 403 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 TMEM132BQ14DG7 1078 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 FAM98BQ52LJ0 330 aaKnown RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 ERAP2Q6P179 960 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 ENGASEQ8NFI3 743 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 TMEM120AQ9BXJ8 343 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 LRG1P02750 347 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 HSMCR30P0CW71 290 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 H2AFXP16104 143 aaPredicted RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 PDPK2PQ6A1A2 396 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 PPP1R14AQ96A00 147 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 RNPEPQ9H4A4 650 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 STN1Q9H668 368 aaKnown RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 FASP25445 335 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 TSNQ15631 228 aaKnown RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 ZBTB49Q6ZSB9 765 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 SLC47A2Q86VL8 602 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 MIEF1Q9NQG6 463 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 TNFAIP8O95379 198 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 BMP10O95393 424 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 TGM3Q08188 693 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 KRT73Q86Y46 540 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 MYH14Q7Z406 1995 aaKnown RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 NFYCQ13952 458 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 MRPL39Q9NYK5 338 aaKnown RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 PDE9AO76083 593 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 TMEM121Q9BTD3 319 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 KIFC1Q9BW19 673 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 SHCBP1LQ9BZQ2 653 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 KLHL20Q9Y2M5 609 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 BCL10O95999 233 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 IL12RB1P42701 662 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 ERVK-24P63145 666 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 CCNG2Q16589 344 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 PDZK1Q5T2W1 519 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 GJB7Q6PEY0 223 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 ATG16L2Q8NAA4 619 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 COPS7BQ9H9Q2 264 aaPredicted RBP17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
NOTCH3-201ENST00000263388 ZNF682O95780 498 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 GLP2RO95838 553 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 S100A9P06702 114 aaKnown RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 VDRP11473 427 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 EPB42P16452 691 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 CENPTQ96BT3 561 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 PNMA8CA0A1B0GUJ8 204 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 PIPSLA2A3N6 862 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 SNPHO15079 494 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 ZNF862O60290 1169 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 MAD2L1Q13257 205 aaPredicted RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 PWP1Q13610 501 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 KCNT1Q5JUK3 1230 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 ERO1BQ86YB8 467 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 RUSC1Q9BVN2 902 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 THAP1Q9NVV9 213 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 UBQLN1Q9UMX0 589 aaKnown RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 SHOC2Q9UQ13 582 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 SLC1A6P48664 564 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 OTUD4Q01804 1114 aaKnown RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 CEP44Q9C0F1 390 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 AFF2P51816 1311 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 MPP3Q13368 585 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 FAM151AQ8WW52 585 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 PCDH9Q9HC56 1237 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 UBA2Q9UBT2 640 aaPredicted RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 PNMA8BQ9ULN7 279 aaPredicted RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 PADI4Q9UM07 663 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 ANKRD6Q9Y2G4 727 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 E9PBE3 544 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 CYP11B2P19099 503 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 AMHR2Q16671 573 aa17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 QKIQ96PU8 341 aaKnown RBP eCLIP17.94■□□□□ 0.46
NOTCH3-201ENST00000263388 TCF7L2Q9NQB0 619 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms