RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 CALN1Q9BXU9 219 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 GPATCH2LQ9NWQ4 482 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 CALCOCO1Q9P1Z2 691 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 HSFX1Q9UBD0 423 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 MKI67P46013 3256 aaKnown RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 COL4A4P53420 1690 aaPredicted RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 TTI1O43156 1089 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 CD48P09326 243 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 RPL17P18621 184 aaKnown RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 TNFRSF8P28908 595 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 AIF1P55008 147 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 DUSP4Q13115 394 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 DPYSL3Q14195 570 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 DPYSL2Q16555 572 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 ZC3H12AQ5D1E8 599 aaKnown RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 SDHAF4Q5VUM1 108 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 TTC27Q6P3X3 843 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 DENND5BQ6ZUT9 1274 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 MON1AQ86VX9 555 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 RFX6Q8HWS3 928 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 VPS52Q8N1B4 723 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 EDEM1Q92611 657 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 FAM204AQ9H8W3 233 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 GDF3Q9NR23 364 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 RASAL2Q9UJF2 1139 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 ZMYND8Q9ULU4 1186 aaPredicted RBP13.55□□□□□ -0.24
VAMP7-201ENST00000262640 AP4E1Q9UPM8 1137 aa13.55□□□□□ -0.24
VAMP7-201ENST00000262640 FAM92AA1XBS5 289 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 TUFMP49411 452 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 CLCN6P51797 869 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 GUCY2DQ02846 1103 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 CREMQ03060 361 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 NME3Q13232 169 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 SND1Q7KZF4 910 aaKnown RBP eCLIP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 CCDC105Q8IYK2 499 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 CCDC185Q8N715 623 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ZNF670Q9BS34 389 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 MAK16Q9BXY0 300 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 FRMD8P1Q9BZ68 369 aaPredicted RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 EPB41L5Q9HCM4 733 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 DDIT4Q9NX09 232 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 FEZ2Q9UHY8 353 aaPredicted RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 FZD10Q9ULW2 581 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ZMYND10O75800 440 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 FGF18O76093 207 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ABLIM3O94929 683 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 YWHAQP27348 245 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 PTGIRP43119 386 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 TFDP2Q14188 446 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 CA9Q16790 459 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 SCD5Q86SK9 330 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 TTC13Q8NBP0 860 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ZNF461Q8TAF7 563 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 GRK7Q8WTQ7 553 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 HNRNPLLQ8WVV9 542 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 ATG4AQ8WYN0 398 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 SLCO2A1Q92959 643 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 NTAN1Q96AB6 310 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 MRPL17Q9NRX2 175 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 PIGVQ9NUD9 493 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 TMEM51Q9NW97 253 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 SSX2IPQ9Y2D8 614 aa13.54□□□□□ -0.24
VAMP7-201ENST00000262640 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
VAMP7-201ENST00000262640 SYNJ2BP-COX16A0A087WUM0 186 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
VAMP7-201ENST00000262640 CST8O60676 142 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 SOAT2O75908 522 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 L1CAMP32004 1257 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 GBP1P32455 592 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 USP46P62068 366 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 RAB33AQ14088 237 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 MAP9Q49MG5 647 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 DRICH1Q6PGQ1 229 aaPredicted RBP13.53□□□□□ -0.24
VAMP7-201ENST00000262640 CCNI2Q6ZMN8 369 aaPredicted RBP13.53□□□□□ -0.24
VAMP7-201ENST00000262640 JAMLQ86YT9 394 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 DQX1Q8TE96 717 aaKnown RBP13.53□□□□□ -0.24
VAMP7-201ENST00000262640 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 WDR6Q9NNW5 1121 aaKnown RBP13.53□□□□□ -0.24
VAMP7-201ENST00000262640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.53□□□□□ -0.244e-13■□□□□ 9.3
VAMP7-201ENST00000262640 COX16Q9P0S2 106 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 FNIP2Q9P278 1114 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 A0A1W2PQH9 124 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 TLL1O43897 1013 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 ECEL1O95672 775 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
VAMP7-201ENST00000262640 SNX1Q13596 522 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms