RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 PTPN9P43378 593 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 PGFP49763 221 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 ZNF252P-AS1Q0IIN9 211 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 C15orf59Q2T9L4 293 aaPredicted RBP16.29■□□□□ 0.2
GYPC-201ENST00000259254 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 SYPL2Q5VXT5 272 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 NYAP1Q6ZVC0 841 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 HS6ST3Q8IZP7 471 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 C12orf76Q8N812 135 aaPredicted RBP16.29■□□□□ 0.2
GYPC-201ENST00000259254 VN1R2Q8NFZ6 395 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 NACA2Q9H009 215 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 SFXN1Q9H9B4 322 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 CLIC5Q9NZA1 410 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 COX16Q9P0S2 106 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 DNAI1Q9UI46 699 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 NUDT5Q9UKK9 219 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 ALG6Q9Y672 507 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 M0QYT0 321 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 KIF2AO00139 706 aaPredicted RBP16.28■□□□□ 0.2
GYPC-201ENST00000259254 FYNP06241 537 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 PTPN2P17706 415 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 GABRR2P28476 465 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 MAN1A1P33908 653 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 GJC1P36383 396 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 PPP3CCP48454 512 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 DNA2P51530 1060 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 ETF1P62495 437 aaKnown RBP16.28■□□□□ 0.2
GYPC-201ENST00000259254 NME3Q13232 169 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 SLC25A52Q3SY17 297 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 PABPC1LQ4VXU2 614 aaKnown RBP16.28■□□□□ 0.2
GYPC-201ENST00000259254 C10orf120Q5SQS8 335 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
GYPC-201ENST00000259254 SCYL2Q6P3W7 929 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 TMC5Q6UXY8 1006 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 SYT10Q6XYQ8 523 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 PDZD4Q76G19 769 aaPredicted RBP16.28■□□□□ 0.2
GYPC-201ENST00000259254 BEND5Q7L4P6 421 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 TADA2BQ86TJ2 420 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 CPNE8Q86YQ8 564 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 LRRC57Q8N9N7 239 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 FAM172AQ8WUF8 416 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 SMG7Q92540 1137 aaKnown RBP16.28■□□□□ 0.2
GYPC-201ENST00000259254 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 TBCBQ99426 244 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 PRKD2Q9BZL6 878 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 TRPC7Q9HCX4 862 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 HCFC1R1Q9NWW0 138 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 OSER1Q9NX31 292 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 RRN3Q9NYV6 651 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 AMFRQ9UKV5 643 aa16.28■□□□□ 0.2
GYPC-201ENST00000259254 NCOR1O75376 2440 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 ZNF840PA6NDX5 716 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 LINC01565O15544 149 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 NCK2O43639 380 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 ZNF500O60304 480 aaPredicted RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 FGF19O95750 216 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 ZDHHC11BP0C7U3 371 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 TFE3P19532 575 aaPredicted RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 CDC25CP30307 473 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 CASQ1P31415 396 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 DEUP1Q05D60 604 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 EFEMP1Q12805 493 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 RARS2Q5T160 578 aaKnown RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 HECTD3Q5T447 861 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 SH3PXD2AQ5TCZ1 1133 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 DAB2IPQ5VWQ8 1189 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 SLFN11Q7Z7L1 901 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 TAC4Q86UU9 113 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 NIPA2Q8N8Q9 360 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 DQX1Q8TE96 717 aaKnown RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 MRPS31Q92665 395 aaKnown RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 WDR24Q96S15 920 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 CDK5RAP1Q96SZ6 601 aaKnown RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 NPY6RQ99463 290 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 APOL5Q9BWW9 433 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 ATXN3LQ9H3M9 355 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
GYPC-201ENST00000259254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.27■□□□□ 0.2
GYPC-201ENST00000259254 DDIT4Q9NX09 232 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 RASAL2Q9UJF2 1139 aa16.27■□□□□ 0.2
GYPC-201ENST00000259254 H3BQ06 376 aaPredicted RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 TLR5O60602 858 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 TRUB2O95900 331 aaKnown RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 F11P03951 625 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 TUBB4AP04350 444 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 RHOP08100 348 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 GBP1P32455 592 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 RDXP35241 583 aaKnown RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 PITX1P78337 314 aaPredicted RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 CYP4F8P98187 520 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 ACAP1Q15027 740 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 HADHQ16836 314 aaKnown RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 DNTTIP2Q5QJE6 756 aaKnown RBP16.26■□□□□ 0.19
GYPC-201ENST00000259254 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
GYPC-201ENST00000259254 SND1Q7KZF4 910 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms