RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 RDXP35241 583 aaKnown RBP18.51■□□□□ 0.55
CCDC115-201ENST00000259229 PAFAH1B1P43034 410 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 C2orf54Q08AI8 447 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 TAF10Q12962 218 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 SMC1AQ14683 1233 aaKnown RBP18.51■□□□□ 0.55
CCDC115-201ENST00000259229 TAZQ16635 292 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 CTAGE6Q86UF2 777 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 SLC13A5Q86YT5 568 aaPredicted RBP18.51■□□□□ 0.55
CCDC115-201ENST00000259229 CTAGE4Q8IX94 777 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 CCDC185Q8N715 623 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 SLC7A14Q8TBB6 771 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 TEKT4Q8WW24 435 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 FBXO32Q969P5 355 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 SAMD11Q96NU1 681 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 NCAPGQ9BPX3 1015 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 RBM12Q9NTZ6 932 aaKnown RBP18.51■□□□□ 0.55
CCDC115-201ENST00000259229 RRN3Q9NYV6 651 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 FBXW11Q9UKB1 542 aa18.51■□□□□ 0.55
CCDC115-201ENST00000259229 I6L893 689 aaPredicted RBP18.5■□□□□ 0.55
CCDC115-201ENST00000259229 MDM4O15151 490 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 PRPSAP2O60256 369 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 CSPG5O95196 566 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 ZRANB2O95218 330 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC115-201ENST00000259229 CD48P09326 243 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 CA8P35219 290 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 PTPN7P35236 360 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 KLF1Q13351 362 aaPredicted RBP18.5■□□□□ 0.55
CCDC115-201ENST00000259229 CA9Q16790 459 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 FAM131BQ86XD5 332 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 GOLGA1Q92805 767 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 RNF25Q96BH1 459 aaPredicted RBP18.5■□□□□ 0.55
CCDC115-201ENST00000259229 RBM41Q96IZ5 413 aaKnown RBP18.5■□□□□ 0.55
CCDC115-201ENST00000259229 TRIM62Q9BVG3 475 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 SMOC2Q9H3U7 446 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 ANLNQ9NQW6 1124 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 ANAPC1Q9H1A4 1944 aa18.5■□□□□ 0.55
CCDC115-201ENST00000259229 EFCAB8A8MWE9 144 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 ADH1AP07327 375 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 SPATA31D3P0C874 917 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 CDKN2BP42772 138 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 DEUP1Q05D60 604 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 ADCY2Q08462 1091 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 TWF1Q12792 350 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 NAA30Q147X3 362 aaPredicted RBP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 LLGL1Q15334 1064 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 ZC3H12AQ5D1E8 599 aaKnown RBP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 BTBD8Q5XKL5 378 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 MSANTD2Q6P1R3 559 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 SCYL2Q6P3W7 929 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 SPOCD1Q6ZMY3 1216 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 SPATA31D4Q6ZUB0 917 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 RCOR2Q8IZ40 523 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 FAM71BQ8TC56 605 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 HSPH1Q92598 858 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 CASP10Q92851 521 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 RPGRIP1Q96KN7 1286 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 MYRFLQ96LU7 910 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 GPATCH2LQ9NWQ4 482 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 hCG_1818297A0A087WSY0 165 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 LRRD1A4D1F6 860 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 H3BNC9 293 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 PRRG1O14668 218 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 IRAK2O43187 625 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 RALAP11233 206 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 DESP17661 470 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 KDELR1P24390 212 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 NME3Q13232 169 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 LONRF2Q1L5Z9 754 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 BOLA3Q53S33 107 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 AP1M1Q9BXS5 423 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 MAGEB5Q9BZ81 275 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 NKX2-4Q9H2Z4 354 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 TMPRSS4Q9NRS4 437 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 DDIT4Q9NX09 232 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 MTMR10Q9NXD2 777 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 CLIC5Q9NZA1 410 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 V9GYY5 206 aaPredicted RBP18.49■□□□□ 0.55
CCDC115-201ENST00000259229 LAMA3Q16787 3333 aa18.49■□□□□ 0.55
CCDC115-201ENST00000259229 SYNJ2BP-COX16A0A087WUM0 186 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 CSH1P0DML2 217 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 CSH2P0DML3 217 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 BMP8BP34820 402 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 ALDH1A3P47895 512 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 CLCN4P51793 760 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 TERF1P54274 439 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 COPS2P61201 443 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 PPP2R5EQ16537 467 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 ADAT2Q7Z6V5 191 aaKnown RBP18.48■□□□□ 0.55
CCDC115-201ENST00000259229 CCDC50Q8IVM0 306 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 ARHGAP18Q8N392 663 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 TRMT2BQ96GJ1 504 aaKnown RBP18.48■□□□□ 0.55
CCDC115-201ENST00000259229 EMILIN2Q9BXX0 1053 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 OSBPL8Q9BZF1 889 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 FAM204AQ9H8W3 233 aa18.48■□□□□ 0.55
CCDC115-201ENST00000259229 COX16Q9P0S2 106 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms