RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 P3H4Q92791 437 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 NT5C3BQ969T7 300 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 CNGB3Q9NQW8 809 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 FNDC1Q4ZHG4 1894 aaPredicted RBP28.8■■■□□ 2.2
CCM2-201ENST00000258781 ETS1P14921 441 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 SULT1E1P49888 294 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 MORF4L2Q15014 288 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 SLC9A4Q6AI14 798 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 ZMIZ2Q8NF64 920 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 MYLPFQ96A32 169 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 CSNK1G1Q9HCP0 422 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 STAP1Q9ULZ2 295 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 APOL1O14791 398 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 RBP3P10745 1247 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 L1CAMP32004 1257 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 NDUFV1P49821 464 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 GATMP50440 423 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 SKOR1P84550 965 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 DMTNQ08495 405 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 DSC1Q08554 894 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 NOMO2Q5JPE7 1267 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 FAM43BQ6ZT52 329 aaPredicted RBP28.79■■■□□ 2.2
CCM2-201ENST00000258781 BNIPLQ7Z465 357 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 PSTKQ8IV42 348 aaKnown RBP28.79■■■□□ 2.2
CCM2-201ENST00000258781 PQLC3Q8N755 202 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 NPY6RQ99463 290 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 PKMYT1Q99640 499 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 AP4E1Q9UPM8 1137 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 PCDHB7Q9Y5E2 793 aa28.79■■■□□ 2.2
CCM2-201ENST00000258781 IFNB1P01574 187 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 SHBGP04278 402 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 CSF2RAP15509 400 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 DAOAP59103 153 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 OVOS1Q6IE37 1185 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 KDM7AQ6ZMT4 941 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 PCGF5Q86SE9 256 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 NLRC5Q86WI3 1866 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 ZNF280BQ86YH2 543 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 THEM5Q8N1Q8 247 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 PLD5Q8N7P1 536 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 PATJQ8NI35 1801 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 NDRG1Q92597 394 aaKnown RBP28.78■■■□□ 2.2
CCM2-201ENST00000258781 ULBP1Q9BZM6 244 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 POPDC2Q9HBU9 364 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 KANSL3Q9P2N6 904 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 PCDHB8Q9UN66 801 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 SHOC2Q9UQ13 582 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 HHLA1C9JL84 531 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 DDHD2O94830 711 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 ROR1Q01973 937 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 MAPRE1Q15691 268 aaKnown RBP28.78■■■□□ 2.2
CCM2-201ENST00000258781 DCAF6Q58WW2 860 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 CNKSR3Q6P9H4 555 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.78■■■□□ 2.2
CCM2-201ENST00000258781 PCDH19Q8TAB3 1148 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 HASPINQ8TF76 798 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 CENPHQ9H3R5 247 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 TBC1D13Q9NVG8 400 aa28.78■■■□□ 2.2
CCM2-201ENST00000258781 TMEM189-UBE2V1I3L0A0 370 aa28.77■■■□□ 2.2
CCM2-201ENST00000258781 RAG1P15918 1043 aa28.77■■■□□ 2.2
CCM2-201ENST00000258781 RFC2P35250 354 aa28.77■■■□□ 2.2
CCM2-201ENST00000258781 ATXN1P54253 815 aaKnown RBP28.77■■■□□ 2.2
CCM2-201ENST00000258781 RNASEH2BQ5TBB1 312 aaKnown RBP28.77■■■□□ 2.2
CCM2-201ENST00000258781 OTUD1Q5VV17 481 aaPredicted RBP28.77■■■□□ 2.2
CCM2-201ENST00000258781 DHX35Q9H5Z1 703 aaKnown RBP28.77■■■□□ 2.2
CCM2-201ENST00000258781 TMEM30AQ9NV96 361 aa28.77■■■□□ 2.2
CCM2-201ENST00000258781 F8W810 466 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 TTC4O95801 387 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 NR1D1P20393 614 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 STIP1P31948 543 aaKnown RBP28.76■■■□□ 2.2
CCM2-201ENST00000258781 RDXP35241 583 aaKnown RBP28.76■■■□□ 2.2
CCM2-201ENST00000258781 CACNA2D1P54289 1103 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 GDF10P55107 478 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 NPNTQ6UXI9 565 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 ZNF771Q7L3S4 317 aaPredicted RBP28.76■■■□□ 2.2
CCM2-201ENST00000258781 KCNK16Q96T55 309 aa28.76■■■□□ 2.2
CCM2-201ENST00000258781 SHOX2O60902 331 aaPredicted RBP28.76■■■□□ 2.19
CCM2-201ENST00000258781 ITGB1P05556 798 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 ZFXP17010 805 aaPredicted RBP28.76■■■□□ 2.19
CCM2-201ENST00000258781 BCAR1P56945 870 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 PPP6R3Q5H9R7 873 aaPredicted RBP28.76■■■□□ 2.19
CCM2-201ENST00000258781 UNC45BQ8IWX7 931 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 CCDC185Q8N715 623 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 NRDE2Q9H7Z3 1164 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 MTMR10Q9NXD2 777 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 CALCOCO1Q9P1Z2 691 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 RCOR3Q9P2K3 495 aaPredicted RBP28.76■■■□□ 2.19
CCM2-201ENST00000258781 FZD10Q9ULW2 581 aa28.76■■■□□ 2.19
CCM2-201ENST00000258781 A6NNZ2 444 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 CYP2F1P24903 491 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 TSPY1Q01534 308 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 TUBB8Q3ZCM7 444 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 UBAP2Q5T6F2 1119 aaKnown RBP28.75■■■□□ 2.19
CCM2-201ENST00000258781 DARS2Q6PI48 645 aaKnown RBP28.75■■■□□ 2.19
CCM2-201ENST00000258781 GPRIN1Q7Z2K8 1008 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 PGM2Q96G03 612 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 CASD1Q96PB1 797 aa28.75■■■□□ 2.19
CCM2-201ENST00000258781 KCTD15Q96SI1 283 aaPredicted RBP28.75■■■□□ 2.19
CCM2-201ENST00000258781 ROPN1BQ9BZX4 212 aaPredicted RBP28.75■■■□□ 2.19
CCM2-201ENST00000258781 ROPN1Q9HAT0 212 aaPredicted RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms