RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 SCUBE3Q8IX30 993 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 SLC44A1Q8WWI5 657 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 RNF157Q96PX1 679 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ACO2Q99798 780 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 FDXACB1Q9BRP7 624 aaPredicted RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 TRPV6Q9H1D0 765 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 SUDS3Q9H7L9 328 aaPredicted RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 EFR3BQ9Y2G0 817 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ZNF536O15090 1300 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 WDR27A2RRH5 827 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 E9PBE3 544 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 MAGEB2O15479 319 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 KLHL41O60662 606 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 NFICP08651 508 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 SLC1A6P48664 564 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 NUDT2P50583 147 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ITGA9Q13797 1035 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 KHDC1Q4VXA5 237 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 KCNT2Q6UVM3 1135 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 TMA16Q96EY4 203 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ZNF570Q96NI8 536 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 C20orf96Q9NUD7 363 aaPredicted RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 NKX1-2Q9UD57 310 aaPredicted RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 EEF2KO00418 725 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 PEX11AO75192 247 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 TMEM63AO94886 807 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ZBTB7AO95365 584 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 RPS12P25398 132 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ATICP31939 592 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 KLF1Q13351 362 aaPredicted RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 USP10Q14694 798 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 EEF1DP3Q658K8 133 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 PDPK2PQ6A1A2 396 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 FBXO16Q8IX29 292 aaPredicted RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 DEFB107AQ8IZN7 70 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 TNIP3Q96KP6 325 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ZNF560Q96MR9 790 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 TBCBQ99426 244 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 CADM1Q9BY67 442 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 SLC5A4Q9NY91 659 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 NPTXRO95502 500 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 CPA3P15088 417 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 GRK2P25098 689 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 DEUP1Q05D60 604 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 RFWD3Q6PCD5 774 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 RIPOR1Q6ZS17 1223 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 MAB21L3Q8N8X9 362 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 COLGALT1Q8NBJ5 622 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 EXT2Q93063 718 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 LRRC39Q96DD0 335 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 UPF3AQ9H1J1 476 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 ELP3Q9H9T3 547 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 SLC39A10Q9ULF5 831 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
SEMA6A-201ENST00000257414 C10orf71Q711Q0 1435 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 VTNP04004 478 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 ERBB2P04626 1255 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 SERPINE1P05121 402 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 PTPRAP18433 802 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 GAD2Q05329 585 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 GALNTL6Q49A17 601 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 ZC3H12AQ5D1E8 599 aaKnown RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 DSTYKQ6XUX3 929 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 EP400NLQ6ZTU2 488 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 FAM183BPQ6ZVS7 135 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 RYBPQ8N488 228 aaPredicted RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 CEP70Q8NHQ1 597 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 SLC35B2Q8TB61 432 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 NAT9Q9BTE0 207 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 SSU72Q9NP77 194 aaKnown RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 C2CD2Q9Y426 696 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 KAT6AQ92794 2004 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 DDX60LQ5H9U9 1706 aaKnown RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 LIN7AO14910 233 aaPredicted RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 B4GALT5O43286 388 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 MAFO75444 373 aaPredicted RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 TCN1P20061 433 aaPredicted RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 ACO1P21399 889 aaKnown RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 AMPD1P23109 780 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 SERPINB5P36952 375 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 CRADDP78560 199 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 OCRLQ01968 901 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 GALNT4Q8N4A0 578 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 BANPQ8N9N5 519 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 PYDC1Q8WXC3 89 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 SNRNP25Q9BV90 132 aaKnown RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 CDT1Q9H211 546 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 DHX33Q9H6R0 707 aaKnown RBP10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 ANLNQ9NQW6 1124 aa10.4□□□□□ -0.74
SEMA6A-201ENST00000257414 GJB1P08034 283 aa10.4□□□□□ -0.75
SEMA6A-201ENST00000257414 MGAT1P26572 445 aa10.4□□□□□ -0.75
SEMA6A-201ENST00000257414 NRLP54845 237 aa10.4□□□□□ -0.75
SEMA6A-201ENST00000257414 MGAT5Q09328 741 aa10.4□□□□□ -0.75
SEMA6A-201ENST00000257414 FLOT2Q14254 428 aa10.4□□□□□ -0.75
SEMA6A-201ENST00000257414 NOMO1Q15155 1222 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms