RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 WDR4P57081 412 aaKnown RBP26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 SLC8A3P57103 927 aa26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 GDF6Q6KF10 455 aaPredicted RBP26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 CXCL17Q6UXB2 119 aa26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 DEFB106AQ8N104 65 aa26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 WNT8BQ93098 351 aa26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 CSPG4P5Q96PW8 444 aa26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 SLC38A7Q9NVC3 462 aa26.16■■□□□ 1.78
TMEM55B-201ENST00000250489 DAB1O75553 588 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 CYBAP13498 195 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 MLH1P40692 756 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 GBE1Q04446 702 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 NUGGCQ68CJ6 796 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 ADGRD1Q6QNK2 874 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 DENND1AQ8TEH3 1009 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 NDRG1Q92597 394 aaKnown RBP26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 TGS1Q96RS0 853 aaKnown RBP26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SMC6Q96SB8 1091 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 PAFAH2Q99487 392 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 CACNG4Q9UBN1 327 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SMG5Q9UPR3 1016 aaKnown RBP26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 TEX264Q9Y6I9 313 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SCN10AQ9Y5Y9 1956 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 BEST1O76090 585 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SULT1E1P49888 294 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 ACTN3Q08043 901 aaPredicted RBP26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SF3A3Q12874 501 aaKnown RBP eCLIP26.15■■□□□ 1.782e-7■□□□□ 10.4
TMEM55B-201ENST00000250489 SLC10A2Q12908 348 aaPredicted RBP26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 XRCC4Q13426 336 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SPRED3Q2MJR0 410 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SLC25A52Q3SY17 297 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 LACTB2Q53H82 288 aaPredicted RBP26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 SYCP2LQ5T4T6 812 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 RSPH3Q86UC2 560 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 KCTD13Q8WZ19 329 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 CAPN7Q9Y6W3 813 aa26.15■■□□□ 1.78
TMEM55B-201ENST00000250489 CCT8L1PA6NM43 557 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 ATP2A2P16615 1042 aaKnown RBP26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 MAGEA6P43360 314 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 NR2C2P49116 596 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 MRPS5P82675 430 aaKnown RBP26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 KIAA0319Q5VV43 1072 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 C4orf33Q8N1A6 199 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 LRRN4Q8WUT4 740 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 FAM149B1Q96BN6 582 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 SENP8Q96LD8 212 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 GAD1Q99259 594 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 FRMD8Q9BZ67 464 aaPredicted RBP26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 SENP6Q9GZR1 1112 aaPredicted RBP26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 KDM4CQ9H3R0 1056 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 ACTR5Q9H9F9 607 aaPredicted RBP26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 ETNK2Q9NVF9 386 aa26.14■■□□□ 1.77
TMEM55B-201ENST00000250489 A0A1W2PPM1 405 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 ASMTLO95671 621 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 CTSHP09668 335 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 IL9RQ01113 521 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 SLC45A4Q5BKX6 768 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 MDH1BQ5I0G3 518 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 OTUD1Q5VV17 481 aaPredicted RBP26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 CLEC20AQ6ZU45 233 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 KLC2Q9H0B6 622 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 CHST12Q9NRB3 414 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 FZD10Q9ULW2 581 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 USP3Q9Y6I4 520 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 PGK1P00558 417 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 CHRNA1P02708 482 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 FOXN2P32314 431 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 AFF1P51825 1210 aaKnown RBP26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 FAXCQ5TGI0 409 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 FAM131BQ86XD5 332 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 HACE1Q8IYU2 909 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 CCDC110Q8TBZ0 833 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 DCAKDQ8WVC6 231 aa26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 UPF3AQ9H1J1 476 aaKnown RBP26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 DDX43Q9NXZ2 648 aaKnown RBP26.13■■□□□ 1.77
TMEM55B-201ENST00000250489 KBTBD13C9JR72 458 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 PIAS1O75925 651 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 TAC1P20366 129 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 YWHAZP63104 245 aaKnown RBP26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 NCBP2-AS2Q69YL0 99 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 C4orf22Q6V702 233 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 PYROXD2Q8N2H3 581 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 AGGF1Q8N302 714 aaeCLIP26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 QKIQ96PU8 341 aaKnown RBP eCLIP26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 MED10Q9BTT4 135 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 LRRC4Q9HBW1 653 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 CRTAC1Q9NQ79 661 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 MIOSQ9NXC5 875 aa26.12■■□□□ 1.77
TMEM55B-201ENST00000250489 DNM1LO00429 736 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 TYROBPO43914 113 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 AVILO75366 819 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 TOMM70O94826 608 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 THP07101 528 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 GHRP10912 638 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 MSH2P43246 934 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 DCAF6Q58WW2 860 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 BNIPLQ7Z465 357 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 SERINC5Q86VE9 423 aa26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 PSTKQ8IV42 348 aaKnown RBP26.11■■□□□ 1.77
TMEM55B-201ENST00000250489 MZB1Q8WU39 189 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms