RNA–Protein interactions for RNA: ENST00000247461.8

CANX-201, Transcript of calnexin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CANX, Length 4,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-201ENST00000247461 SLC6A3Q01959 620 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 WSCD1Q658N2 575 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 CYB5D1Q6P9G0 228 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 NPNTQ6UXI9 565 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
CANX-201ENST00000247461 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 SIX2Q9NPC8 291 aa16.32■□□□□ 0.2
CANX-201ENST00000247461 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 APOC2P02655 101 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 JAM2P57087 298 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 LRRC36Q1X8D7 754 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 TMTC4Q5T4D3 741 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 BRI3BPQ8WY22 251 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 FGD4Q96M96 766 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 TBCBQ99426 244 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 NXF3Q9H4D5 531 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 KIAA0100Q14667 2235 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 RASSF10A6NK89 507 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 OPLAHO14841 1288 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 LHX1P48742 406 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 TWF1Q12792 350 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 HIC1Q14526 733 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 KRT80Q6KB66 452 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 PHF13Q86YI8 300 aaPredicted RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 VCX3AQ9NNX9 186 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 LSM7Q9UK45 103 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 GNGT2O14610 69 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 NVLO15381 856 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 TREHO43280 583 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 ADSSP30520 456 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 EGFL8Q99944 293 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 NDFIP2Q9NV92 336 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 ST3GAL5Q9UNP4 418 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 TMEM88BA6NKF7 163 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 AP3B1O00203 1094 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 BDNFP23560 247 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 HARS2P49590 506 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 ATXN3P54252 364 aaPredicted RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 DRG2P55039 364 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 CES3Q6UWW8 571 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 TCP10LQ8TDR4 215 aa16.31■□□□□ 0.2
CANX-201ENST00000247461 DHX33Q9H6R0 707 aaKnown RBP16.31■□□□□ 0.2
CANX-201ENST00000247461 DDX3YO15523 660 aaKnown RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 USP12O75317 370 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 MYL2P10916 166 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 ENO3P13929 434 aaPredicted RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 BGNP21810 368 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 JOSD2Q8TAC2 188 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 GOLGA2P5Q9HBQ8 144 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 HACD3Q9P035 362 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 R3HDM2Q9Y2K5 976 aaKnown RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 GLRBP48167 497 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 STKLD1Q8NE28 680 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 ULK4Q96C45 1275 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 MTBPQ96DY7 904 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 AIM2O14862 343 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 PSMD3O43242 534 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 LIASO43766 372 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 AP2B1P63010 937 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 EFTUD2Q15029 972 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■■■□ 24.6
CANX-201ENST00000247461 PRPF39Q86UA1 669 aaKnown RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 ZCCHC9Q8N567 271 aaKnown RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 MAML3Q96JK9 1138 aa16.3■□□□□ 0.2
CANX-201ENST00000247461 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.3■□□□□ 0.2
CANX-201ENST00000247461 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 CYBBP04839 570 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
CANX-201ENST00000247461 TPH1P17752 444 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 MMP8P22894 467 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
CANX-201ENST00000247461 ANKRD20A4Q4UJ75 823 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 ANKRD20A8PQ5CZ79 823 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 ANKRD20A2Q5SQ80 823 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 ANKRD20A1Q5TYW2 823 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 CD248Q9HCU0 757 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 AFF4Q9UHB7 1163 aaKnown RBP16.29■□□□□ 0.2
CANX-201ENST00000247461 SH3BP1Q9Y3L3 701 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 C5P01031 1676 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 BANF1O75531 89 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 RAD51Q06609 339 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 DPYSL3Q14195 570 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 BTG3Q14201 252 aaPredicted RBP16.29■□□□□ 0.2
CANX-201ENST00000247461 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 TTC30BQ8N4P2 665 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 PPTC7Q8NI37 304 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 C12orf42Q96LP6 360 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 NEUROG2Q9H2A3 272 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
CANX-201ENST00000247461 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
CANX-201ENST00000247461 POLE2P56282 527 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms