RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 WDR18Q9BV38 432 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 DTNAQ9Y4J8 743 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 EIF4BP23588 611 aaKnown RBP19.02■□□□□ 0.64
CLIP2-201ENST00000223398 MCOLN2Q8IZK6 566 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 KLRG1Q96E93 195 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 COPS7BQ9H9Q2 264 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-201ENST00000223398 BLOC1S4Q9NUP1 217 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 NOP53Q9NZM5 478 aaKnown RBP19.02■□□□□ 0.64
CLIP2-201ENST00000223398 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-201ENST00000223398 O00370 1275 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 RTN3O95197 1032 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-201ENST00000223398 CYP3A4P08684 503 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 KCNK10P57789 538 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 GALNTL6Q49A17 601 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 MAP4K3Q8IVH8 894 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 VANGL2Q9ULK5 521 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 KPNA3O00505 521 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-201ENST00000223398 PLA2G6O60733 806 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 DOK6Q6PKX4 331 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 LRIG3Q6UXM1 1119 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 SERPINB11Q96P15 392 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 ZIM3Q96PE6 472 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 ULBP1Q9BZM6 244 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 ARL2BPQ9Y2Y0 163 aa19.02■□□□□ 0.64
CLIP2-201ENST00000223398 GLTPD2A6NH11 291 aa19.02■□□□□ 0.63
CLIP2-201ENST00000223398 MYBPC2Q14324 1141 aa19.02■□□□□ 0.63
CLIP2-201ENST00000223398 CORO1BQ9BR76 489 aa19.02■□□□□ 0.63
CLIP2-201ENST00000223398 LRRC40Q9H9A6 602 aa19.02■□□□□ 0.63
CLIP2-201ENST00000223398 PDZK1P1A8MUH7 402 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 MEIS2O14770 477 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 GLP2RO95838 553 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 PDHA1P08559 390 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 SLC44A2Q8IWA5 706 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-201ENST00000223398 RUBCNQ92622 972 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 UXTQ9UBK9 157 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-201ENST00000223398 PEX10O60683 326 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 CES5AQ6NT32 575 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 TRMT11Q7Z4G4 463 aaKnown RBP19.01■□□□□ 0.63
CLIP2-201ENST00000223398 IL17RAQ96F46 866 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 AGXT2Q9BYV1 514 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 ARHGAP20Q9P2F6 1191 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 BAZ2BQ9UIF8 2168 aaKnown RBP19.01■□□□□ 0.63
CLIP2-201ENST00000223398 DMC1Q14565 340 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 INPP5AQ14642 412 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 TCEA2Q15560 299 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 STRA8Q7Z7C7 330 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 LRRC6Q86X45 466 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 VPS37AQ8NEZ2 397 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 SGSM3Q96HU1 749 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 MANSC1Q9H8J5 431 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 RAD18Q9NS91 495 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 STOML1Q9UBI4 398 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 NT5C1B-RDH14C9J2C7 533 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 AKAP10O43572 662 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
CLIP2-201ENST00000223398 NFICP08651 508 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 SERPINF2P08697 491 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 B4GALNT2Q8NHY0 566 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 ACTL9Q8TC94 416 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 CASKIN2Q8WXE0 1202 aa19.01■□□□□ 0.63
CLIP2-201ENST00000223398 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.01■□□□□ 0.632e-7■■■■■ 65.3
CLIP2-201ENST00000223398 PRPF18Q99633 342 aaKnown RBP19.01■□□□□ 0.63
CLIP2-201ENST00000223398 TBC1D3BA6NDS4 549 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 E5RJQ4 531 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 PJA2O43164 708 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 ATP9AO75110 1047 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 PPP1R37O75864 691 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 ACOX1Q15067 660 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 FIBCD1Q8N539 461 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 PCNAP12004 261 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 NME5P56597 212 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 FRMD8Q9BZ67 464 aaPredicted RBP19■□□□□ 0.63
CLIP2-201ENST00000223398 TBC1D12O60347 775 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 SH3BGRP55822 239 aaPredicted RBP19■□□□□ 0.63
CLIP2-201ENST00000223398 DLG4P78352 724 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 ZNF614Q8N883 585 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 DTX3LQ8TDB6 740 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 TKTL2Q9H0I9 626 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 LNPEPQ9UIQ6 1025 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 CENPAP49450 140 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 TERF2Q15554 542 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 LRRC36Q1X8D7 754 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 NBPF20Q3BBV1 942 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 TUBGCP3Q96CW5 907 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 UBE2OQ9C0C9 1292 aaKnown RBP19■□□□□ 0.63
CLIP2-201ENST00000223398 YY1AP1Q9H869 796 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 ST3GAL5Q9UNP4 418 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 PSMD10O75832 226 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
CLIP2-201ENST00000223398 OVGP1Q12889 678 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 PHKG1Q16816 387 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 OR9Q1Q8NGQ5 310 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 EXD1Q8NHP7 514 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 LACRTQ9GZZ8 138 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 SPG21Q9NZD8 308 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 ARHGAP26Q9UNA1 814 aa19■□□□□ 0.63
CLIP2-201ENST00000223398 ERVK-10P10266 1014 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 FLOT2Q14254 428 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 CBWD6Q4V339 395 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 CBWD3Q5JTY5 395 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms