RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PEX2P28328 305 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 PAOXQ6QHF9 649 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 RNF169Q8NCN4 708 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 PLEKHA8Q96JA3 519 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 TEX13BQ9BXU2 312 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 ZNF696Q9H7X3 374 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 KMT5AQ9NQR1 393 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 DIS3Q9Y2L1 958 aaKnown RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 PTPRFP10586 1907 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 LOC285556D6RIA3 1793 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ATP2A1O14983 1001 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 PMM2O15305 246 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 DENRO43583 198 aaKnown RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ACADSBP45954 432 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SLC5A3P53794 718 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SP4Q02446 784 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 PPATQ06203 517 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ZNF829Q3KNS6 432 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SWSAP1Q6NVH7 229 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 PPP1R2P3Q6NXS1 205 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SLC39A4Q6P5W5 647 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 RFPL4BQ6ZWI9 263 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 TMPRSS6Q8IU80 811 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 CCDC60Q8IWA6 550 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 THAP2Q9H0W7 228 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 GGA3Q9NZ52 723 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 VPS51Q9UID3 782 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 EXOC7Q9UPT5 735 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 PCDHA3Q9Y5H8 950 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 B2RBV5 119 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SORBS3O60504 671 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 CDH16O75309 829 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 TCEA3O75764 348 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 TM7SF2O76062 418 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ZBTB11O95625 1053 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 CHEK2O96017 543 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 RBP3P10745 1247 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 HMOX2P30519 316 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ZBTB16Q05516 673 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 APOFQ13790 326 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 RAVER1Q8IY67 606 aaKnown RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ULK2Q8IYT8 1036 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 AHI1Q8N157 1196 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SLC25A41Q8N5S1 370 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 DENND1AQ8TEH3 1009 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SEMA4DQ92854 862 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 MTBPQ96DY7 904 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SGF29Q96ES7 293 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 NTPCRQ9BSD7 190 aaKnown RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 JPH1Q9HDC5 661 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-201ENST00000220429 XPNPEP1Q9NQW7 623 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 CNGB3Q9NQW8 809 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 PDLIM7Q9NR12 457 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 MRGBPQ9NV56 204 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ANKFY1Q9P2R3 1169 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 SLC7A8Q9UHI5 535 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ADAMTS6Q9UKP5 1117 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 GRID1Q9ULK0 1009 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 ERVK-11Q9UQG0 969 aa14.11□□□□□ -0.15
GABPB1-201ENST00000220429 FARP2O94887 1054 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-201ENST00000220429 THRAP10827 490 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 C21orf59P57076 290 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 TMTC4Q5T4D3 741 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 DCAF12L1Q5VU92 463 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 KAZNQ674X7 775 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 RWDD4Q6NW29 188 aaKnown RBP14.1□□□□□ -0.15
GABPB1-201ENST00000220429 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 PRR11Q96HE9 360 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-201ENST00000220429 CLPTM1LQ96KA5 538 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 GCNAQ96QF7 691 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 SGIP1Q9BQI5 828 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 SLC9A2Q9UBY0 812 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 COG5Q9UP83 839 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 NFASCO94856 1347 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 A0A0G2JND7 137 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 ANKRD62A6NC57 917 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 KRT75O95678 551 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 PSAPP07602 524 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 C6orf222P0C671 652 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-201ENST00000220429 CETPP11597 493 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 CHRNA3P32297 505 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 FDFT1P37268 417 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 ACTR2P61160 394 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 EFTUD2Q15029 972 aaKnown RBP eCLIP14.1□□□□□ -0.151e-5■□□□□ 9
GABPB1-201ENST00000220429 RASA2Q15283 850 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 OGFOD2Q6N063 350 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 RNF111Q6ZNA4 994 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 LPCAT2Q7L5N7 544 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 UBE2Q1Q7Z7E8 422 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 ITIH5Q86UX2 942 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 CACTIN-AS1Q8N1I8 211 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 SUN5Q8TC36 379 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 VTI1AQ96AJ9 217 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 ERLEC1Q96DZ1 483 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 KREMEN1Q96MU8 473 aa14.1□□□□□ -0.15
GABPB1-201ENST00000220429 POP1Q99575 1024 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms