RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 LRRC38Q5VT99 294 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 IZUMO3Q5VZ72 239 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ALKAL1Q6UXT8 129 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ANKS1BQ7Z6G8 1248 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 MAP7D3Q8IWC1 876 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 FAM172AQ8WUF8 416 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 SAMD15Q9P1V8 674 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 SFMBT1Q9UHJ3 866 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 H7C0C1 242 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ATP6V1G2O95670 118 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CD48P09326 243 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 KCNE1P15382 129 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ITIH2P19823 946 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ATP5OP48047 213 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CLCNKBP51801 687 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SLC6A3Q01959 620 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SLC29A2Q14542 456 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 P3H1Q32P28 736 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 HP1BP3Q5SSJ5 553 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 C1orf228Q6PIY5 440 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CAPN12Q6ZSI9 719 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SERINC5Q86VE9 423 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ZC3H18Q86VM9 953 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SIX6OS1Q8N1H7 587 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ZFAND2BQ8WV99 257 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 MCRS1Q96EZ8 462 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SENP8Q96LD8 212 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 SEMA4AQ9H3S1 761 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 DDX43Q9NXZ2 648 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 HEY1Q9Y5J3 304 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 MGAMO43451 1857 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 hCG_1818297A0A087WSY0 165 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 TCRBV5S1A1TA0A578 114 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 PTGESO14684 152 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CAPN9O14815 690 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 MAP3K6O95382 1288 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 KDELR1P24390 212 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 YY1P25490 414 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ZNF143P52747 638 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 DRG2P55039 364 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 COPS2P61201 443 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 OTUD4Q01804 1114 aaKnown RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 RIPK1Q13546 671 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ITIH4Q14624 930 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CCDC142Q17RM4 750 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CROCCP2Q86T23 111 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 C12orf50Q8NA57 414 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ANKRD52Q8NB46 1076 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 B3GALNT2Q8NCR0 500 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ACTL9Q8TC94 416 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 CLEC4CQ8WTT0 213 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 GRHL1Q9NZI5 618 aa9.26□□□□□ -0.93
MTHFD1-201ENST00000216605 ARL5CA6NH57 179 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 ETS1P14921 441 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 RAB6CQ53S08 254 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 DARS2Q6PI48 645 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 ZDHHC24Q6UX98 284 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 SYDE1Q6ZW31 735 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 NDRG1Q92597 394 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 TBC1D31Q96DN5 1066 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 PWWP2AQ96N64 755 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 TSC22D3Q99576 134 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 FAM129AQ9BZQ8 928 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 RAB6CQ9H0N0 254 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 SRRDQ9UH36 339 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 CORO1CQ9ULV4 474 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 ANK1P16157 1881 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 GOLGA8MH3BSY2 632 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 MCF2LO15068 1137 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 LIASO43766 372 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 ADAMTS4O75173 837 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 TRUB2O95900 331 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 PTPN1P18031 435 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 CDKN2BP42772 138 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 RABGGTBP53611 331 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 MAP3K7CLP57077 242 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 MYBPC3Q14896 1274 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 C10orf62Q5T681 223 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 METTL23Q86XA0 190 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 NIPA2Q8N8Q9 360 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 SMYD1Q8NB12 490 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 BBOF1Q8ND07 529 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 FNIP1Q8TF40 1166 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 KBTBD7Q8WVZ9 684 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 SENP6Q9GZR1 1112 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 RSPH9Q9H1X1 276 aaPredicted RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 PABPC3Q9H361 631 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 RSAD1Q9HA92 442 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 ZDHHC18Q9NUE0 388 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 MIOSQ9NXC5 875 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 C2CD4BA6NLJ0 364 aa9.25□□□□□ -0.93
MTHFD1-201ENST00000216605 RGS16O15492 202 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms