RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Nt5c1bQ91YE9 573 aa18.98■□□□□ 0.63
Trim47-202ENSMUST00000106441 Pde6cQ91ZQ1 861 aa18.98■□□□□ 0.63
Trim47-202ENSMUST00000106441 Map4k3Q99JP0 894 aa18.98■□□□□ 0.63
Trim47-202ENSMUST00000106441 Q9D2Q3 444 aa18.98■□□□□ 0.63
Trim47-202ENSMUST00000106441 Wnt8bQ9WUD6 350 aa18.98■□□□□ 0.63
Trim47-202ENSMUST00000106441 Pck1Q9Z2V4 622 aa18.98■□□□□ 0.63
Trim47-202ENSMUST00000106441 Ssxb9A2BI93 185 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Vmn2r104E9Q2J5 860 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Plekha5E9Q6H8 1269 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 SprtnG3X912 497 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 PigrO70570 771 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Ass1P16460 412 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Gnat1P20612 350 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 SPINDOCQ05AH6 381 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Tmem65Q4VAE3 234 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Xkr4Q5GH67 647 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Cd180Q62192 661 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Btbd10Q80X66 475 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Znf365Q8BG89 408 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Znf76Q8BMU0 568 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Trerf1Q8BXJ2 1205 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Ccser1Q8C0C4 895 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 NcaphQ8C156 731 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 OgtQ8CGY8 1046 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Arfip2Q8K221 341 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Atp13a1Q9EPE9 1200 aaKnown RBP18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Ror2Q9Z138 944 aa18.97■□□□□ 0.63
Trim47-202ENSMUST00000106441 Ptchd4B9EKX1 904 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 F6Y6L6 278 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Cdh16O88338 830 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Hoxb8P09632 243 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Eif3eP60229 445 aaKnown RBP18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Tfdp2Q64163 446 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Ptk6Q64434 451 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Spata7Q80VP2 582 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 RimklbQ80WS1 387 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Zfp263Q8CF60 680 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Smtnl2Q8CI12 456 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Mcoln2Q8K595 566 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Q922R1 422 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Arid3bQ9Z1N7 568 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Mocs3A2BDX3 460 aaKnown RBP18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Olfr456B2RT27 312 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Olfr310B2RVZ1 332 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Vmn2r87E9PZX4 848 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 AgxtO35423 414 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 DffaO54786 331 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Gnrh1P13562 90 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Pdha1P35486 390 aaKnown RBP18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 HalP35492 657 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Btbd1P58544 488 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Psmc1P62192 440 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Smyd1P97443 490 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Zscan2Q07230 614 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Slc17a7Q3TXX4 560 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 FaxcQ3UMF9 409 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 PterQ60866 349 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Hif1aQ61221 836 aaKnown RBP18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 HomezQ80W88 542 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 NfascQ810U3 1240 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Rps6kc1Q8BLK9 1056 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Kctd12bQ8C7J6 292 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Olfr458Q8VF80 313 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Olfr457Q8VGP5 313 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Gps1Q99LD4 471 aaKnown RBP18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 MlklQ9D2Y4 472 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Plscr2Q9DCW2 307 aa18.96■□□□□ 0.63
Trim47-202ENSMUST00000106441 Gm12800B1AUV4 484 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Pate3B3GLJ3 98 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gm4788E9Q8B5 879 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gm12794L7MTS5 483 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Ppm1aP49443 382 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Pi4k2aQ2TBE6 479 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Prmt9Q3U3W5 846 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Lrch2Q3UMG5 773 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 KizQ3UXL4 695 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Grb10Q60760 621 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Acvrl1Q61288 502 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Acap2Q6ZQK5 770 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Q8BZE1 841 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 4921504E06RikQ8CET2 560 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Adnp2Q8CHC8 1165 aaKnown RBP18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 MutyhQ99P21 515 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Mxra7Q9CZH7 178 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gucy2dA0A0U1RPR8 1117 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Apol11aE9PZG0 334 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gm3424L7N298 263 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gm8246M0QWX9 263 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Acvr2bP27040 536 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 InhbaQ04998 424 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Rbl2Q64700 1135 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Dzip3Q7TPV2 1204 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Q8BGA7 448 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Chmp2bQ8BJF9 213 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gjc2Q8BQU6 440 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Nipal4Q8BZF2 406 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Adgrg3Q8R0T6 542 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Alas1Q8VC19 642 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Socs4Q91ZA6 436 aa18.95■□□□□ 0.62
Trim47-202ENSMUST00000106441 Decr1Q9CQ62 335 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms