RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Farp1F8VPU2 1048 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Lamp1P11438 406 aaKnown RBP16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Igfbp4P47879 254 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 FerP70451 823 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 1810049J17RikQ3V2G9 153 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Gdpd5Q640M6 607 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Rps6kc1Q8BLK9 1056 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Olfr356Q8VFP5 315 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Lrrc71Q9D3W5 558 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Capn7Q9R1S8 813 aa16.59■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Myo18aQ9JMH9 2050 aaKnown RBP16.58■□□□□ 0.25
Ckap4-201ENSMUST00000053871 Ebf2O08792 575 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Esyt3Q5DTI8 891 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Bcar1Q61140 874 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Eif2dQ61211 570 aaKnown RBP16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Itgbl1Q8VDV0 494 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Agap3Q8VHH5 910 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Afg3l1Q920A7 789 aaKnown RBP16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Decr1Q9CQ62 335 aaKnown RBP16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Oma1Q9D8H7 521 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Acox2Q9QXD1 681 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Gm6588E9Q3K0 461 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Akap1O08715 857 aaKnown RBP16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Olfm1O88998 485 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Tsta3P23591 321 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Fen1P39749 378 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 IhhP97812 411 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Atp9bP98195 1146 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 OtulinQ3UCV8 352 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Tmem45aQ60774 273 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 SnrpaQ62189 287 aaKnown RBP16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Cdkn2aipQ8BI72 563 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Ppme1Q8BVQ5 386 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Lrrc19Q8BZT5 364 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Rmdn1Q9DCV4 305 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Plscr2Q9DCW2 307 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Doc2gQ9ESN1 387 aa16.58■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Robo3Q9Z2I4 1366 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Exoc7O35250 697 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Cyp2j6O54750 501 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 PfkmP47857 780 aaKnown RBP16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Q3TQQ9 903 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 GnasQ6R0H7 1133 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Zfp759Q7M6X3 721 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Slc17a6Q8BLE7 582 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Dis3lQ8C0S1 1053 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Nudcd3Q8R1N4 363 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Tmprss4Q8VCA5 435 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Txndc12Q9CQU0 170 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Rnaseh2aQ9CWY8 301 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Arhgap8Q9CXP4 425 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Dcaf6Q9DC22 876 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Nme3Q9WV85 169 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Tnfrsf11bO08712 401 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Dnase1l3O55070 310 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Abcb1bP06795 1276 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Zc3h15Q3TIV5 426 aaKnown RBP16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Mif4gdQ3UBZ5 222 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Orc2Q60862 576 aaKnown RBP16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Grik1Q60934 836 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Arrdc3Q7TPQ9 414 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Ddx1Q91VR5 740 aaKnown RBP16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Wrnip1Q91XU0 660 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Tbrg4Q91YM4 630 aaKnown RBP16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 MutyhQ99P21 515 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 CoprsQ9CQ13 173 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Tex9Q9D845 387 aa16.57■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Ccng1P51945 294 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Gata5P97489 404 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Mgat3Q10470 538 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Arhgap45Q3TBD2 1116 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Gm8773Q3UQ24 132 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Spag6Q3V0U9 509 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Kctd8Q50H33 476 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 IqceQ6PCQ0 778 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Nemp1Q6ZQE4 437 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Olfr1057Q7TR75 315 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Exoc3l1Q8BI71 739 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Acbd3Q8BMP6 525 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Brat1Q8C3R1 822 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Lrif1Q8CDD9 755 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Unc45bQ8CGY6 931 aaKnown RBP16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Dync1li1Q8R1Q8 523 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Ubxn2aQ99KJ0 258 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 MtrexQ9CZU3 1040 aaKnown RBP16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Znf687Q9D2D7 1237 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Riok3Q9DBU3 519 aaKnown RBP16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Fbxo16Q9QZM9 334 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Fam155bA2BDP1 471 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Ces1bD3Z5G7 567 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Sptlc1O35704 473 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 HdcP23738 662 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Pdha1P35486 390 aaKnown RBP16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Arhgap10Q6Y5D8 786 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Adamts2Q8C9W3 1213 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 NaprtQ8CC86 538 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Il31raQ8K5B1 716 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Znf426Q8R1D1 550 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 QpctQ9CYK2 362 aa16.56■□□□□ 0.24
Ckap4-201ENSMUST00000053871 Prl2a1Q9JHK0 228 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms