RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Vwa5b1A9Z1V5 1215 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm5689F6Y2A6 97 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 ClockO08785 855 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 EpoP07321 192 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zfy1P10925 782 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Frg1P97376 258 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Muc1Q02496 630 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Grid2ipQ0QWG9 1203 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam169aQ5XG69 665 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Celf6Q7TN33 460 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr212Q7TS33 327 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ppm1mQ8BU27 406 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Smap1Q91VZ6 440 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Prmt3Q922H1 532 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ints11Q9CWS4 600 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q9CXL3 195 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ltb4r2Q9JJL9 360 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ruvbl2Q9WTM5 463 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Eif2ak3Q9Z2B5 1114 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Unc13dB2RUP2 1085 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tekt5G5E8A8 557 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r46L7N282 809 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Slc16a8O35308 492 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sdc4O35988 198 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Asna1O54984 348 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ripk2P58801 539 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Klra8Q60682 266 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr8Q60892 310 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Lrrc1Q80VQ1 524 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Btbd10Q80X66 475 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Epb41l5Q8BGS1 731 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tbc1d10bQ8BHL3 798 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nipal1Q8BMW7 416 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 EtnpplQ8BWU8 499 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Eno4Q8C042 619 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PiguQ8K358 434 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam151aQ8QZW3 608 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Actr8Q8R2S9 624 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rprd1aQ8VDS4 312 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ing3Q8VEK6 421 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ndufv1Q91YT0 464 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rassf3Q99P51 232 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ppil6Q9D6D8 278 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ifi30Q9ESY9 248 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Katna1Q9WV86 491 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Trpc7Q9WVC5 862 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mettl1Q9Z120 268 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cep152A2AUM9 1736 aaKnown RBP9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Unc13aQ4KUS2 1712 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Btbd18A0A0A6YY25 723 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kdelc2G5E897 503 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Igfbp4P47879 254 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dnal1Q05A62 190 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam196bQ6GQV1 535 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Podnl1Q6P3Y9 559 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mon1aQ6PDG8 556 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Stk40Q7TNL3 435 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rps6ka6Q7TPS0 764 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Celf4Q7TSY6 486 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ints6lQ8BND4 861 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fgd2Q8BY35 655 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Alg9Q8VDI9 611 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Asb7Q91ZU0 318 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Polr3hQ9D2C6 204 aaKnown RBP9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmem176aQ9DCS1 244 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tlr9Q9EQU3 1032 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zscan4-ps1A0A1C7CYV3 506 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ccdc163A2AGD7 326 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rad21l1A2AU37 552 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zscan4dA7KBS4 506 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sptlc1O35704 473 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cd40lgP27548 260 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 FynP39688 537 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PtpaP58389 323 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gspt2Q149F3 632 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zscan4fQ3URS2 506 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 GpamQ61586 827 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ntrk3Q6VNS1 825 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zfyve28Q6ZPK7 905 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zscan4cQ80VJ6 506 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nipa1Q8BHK1 323 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cpne3Q8BT60 533 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mab21L3Q8CI17 429 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tlcd1Q99JT6 247 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 2310003L06RikQ9CV82 495 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 AcadsbQ9DBL1 432 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tlr5Q9JLF7 859 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Depdc5P61460 1591 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr743L7N1Y2 311 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rpl3P27659 403 aaKnown RBP9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Msh2P43247 935 aaKnown RBP9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 GclcP97494 637 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Plk1Q07832 603 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Arid5aQ3U108 590 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cdkn2aipQ8BI72 563 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Teddm1bQ8CC62 306 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gtf2a1lQ8R4I4 468 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dpp3Q99KK7 738 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dpy30Q99LT0 99 aa9.41□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Atp5f1Q9CQQ7 256 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms