RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 NDUFA8P51970 172 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 CLEC20AQ6ZU45 233 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 TMEFF1Q8IYR6 380 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 TERB1Q8NA31 727 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 OLIG1Q8TAK6 271 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 OTUB2Q96DC9 234 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 SPACA7Q96KW9 195 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 IMPG2Q9BZV3 1241 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 POLMQ9NP87 494 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-213ENST00000641272 TLR8Q9NR97 1041 aaKnown RBP17.65■□□□□ 0.42
PHGDH-213ENST00000641272 DNAJC17Q9NVM6 304 aaKnown RBP17.65■□□□□ 0.42
PHGDH-213ENST00000641272 ANGPTL2Q9UKU9 493 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 KMT2BQ9UMN6 2715 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-213ENST00000641272 CEP192Q8TEP8 1941 aa17.64■□□□□ 0.42
PHGDH-213ENST00000641272 KIF20AO95235 890 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 ACO1P21399 889 aaKnown RBP17.64■□□□□ 0.41
PHGDH-213ENST00000641272 CMA1P23946 247 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 P2RY2P41231 377 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 PTGER3P43115 390 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 SYKP43405 635 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 NOVA1P51513 510 aaKnown RBP17.64■□□□□ 0.41
PHGDH-213ENST00000641272 PPP3CAQ08209 521 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 EGFLAMQ63HQ2 1017 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 TPGS1Q6ZTW0 290 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 C11orf74Q86VG3 221 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 MIB1Q86YT6 1006 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 TAF4BQ92750 862 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 BHMTQ93088 406 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 LSM14BQ9BX40 385 aaKnown RBP17.64■□□□□ 0.41
PHGDH-213ENST00000641272 FBXO44Q9H4M3 255 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 NMUR1Q9HB89 426 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 CSNK1G1Q9HCP0 422 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 DEC1Q9P2X7 70 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 MBD1Q9UIS9 605 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-213ENST00000641272 LAMA1P25391 3075 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 ADAMTS9Q9P2N4 1935 aa17.64■□□□□ 0.41
PHGDH-213ENST00000641272 A0A1W2PQH9 124 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 HHLA1C9JL84 531 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 KHNYNO15037 678 aaKnown RBP17.63■□□□□ 0.41
PHGDH-213ENST00000641272 MAP3K13O43283 966 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 HOXB2P14652 356 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 KRT85P78386 507 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 INCA1Q0VD86 236 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 UAP1L1Q3KQV9 507 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 ZNF394Q53GI3 561 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 GRAMD4Q6IC98 578 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 LPCAT2Q7L5N7 544 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 UNC93AQ86WB7 457 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 CRYBG2Q8N1P7 616 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 DEFB119Q8N690 84 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 BBS2Q9BXC9 721 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 KLF16Q9BXK1 252 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-213ENST00000641272 NIF3L1Q9GZT8 377 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 GOLPH3LQ9H4A5 285 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 COMMD8Q9NX08 183 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 HCN2Q9UL51 889 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 TRAF3IP3Q9Y228 551 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
PHGDH-213ENST00000641272 GREM1O60565 184 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 KRT13P13646 458 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 TNFRSF4P43489 277 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 ZNF252P-AS1Q0IIN9 211 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 DPYDQ12882 1025 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 HSF5Q4G112 596 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-213ENST00000641272 TRIM61Q5EBN2 209 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 TOGARAM2Q6ZUX3 1019 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 SMYD4Q8IYR2 804 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-213ENST00000641272 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
PHGDH-213ENST00000641272 CYFIP2Q96F07 1278 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 EEF2KMTQ96G04 330 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 ACOX2Q99424 681 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 NT5C1AQ9BXI3 368 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 TMEM9BQ9NQ34 198 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 FSCN3Q9NQT6 498 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 PLK2Q9NYY3 685 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 CALCOCO1Q9P1Z2 691 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 USP25Q9UHP3 1055 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 SCML2Q9UQR0 700 aa17.62■□□□□ 0.41
PHGDH-213ENST00000641272 IKBKBO14920 756 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 CILPO75339 1184 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 RHOBTB3O94955 611 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 RARGP13631 454 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 TYRP14679 529 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 GABRG2P18507 467 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 TRIM21P19474 475 aaKnown RBP17.61■□□□□ 0.41
PHGDH-213ENST00000641272 ATP5C1P36542 298 aaKnown RBP17.61■□□□□ 0.41
PHGDH-213ENST00000641272 MAPK8P45983 427 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 IRX4P78413 519 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 MAP7D1Q3KQU3 841 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 C10orf120Q5SQS8 335 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 SH3PXD2AQ5TCZ1 1133 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 HNRNPABQ99729 332 aaKnown RBP17.61■□□□□ 0.41
PHGDH-213ENST00000641272 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 CD93Q9NPY3 652 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 CYLDQ9NQC7 956 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
PHGDH-213ENST00000641272 LSM7Q9UK45 103 aaKnown RBP17.61■□□□□ 0.41
PHGDH-213ENST00000641272 RAD54BQ9Y620 910 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms